Limnobaculum parvum: HYN51_04840
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Entry
HYN51_04840 CDS
T05491
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpv03016
]
HYN51_04840
Enzymes [BR:
lpv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HYN51_04840
Transfer RNA biogenesis [BR:
lpv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HYN51_04840
Prokaryotic type
HYN51_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AWH87941
UniProt:
A0A2Y9TWJ0
LinkDB
All DBs
Position
complement(2567878..2568918)
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AA seq
346 aa
AA seq
DB search
MMSLSWLYGEPAATGVLKKFPQDFCVKEDLGFEPDGEGEHVLVYLRKTGCNTQFVADNLA
RFAKVSGRVVSYAGLKDRHAVTEQWFCLQMPGKETPDFSAFSLEGCEVLKVARHRRKLRI
GTLKGNFFQLVLRDISLKDDVESRLQKIQHSGAANYFGEQRFGRQGSNLVMAERWANNEI
SVKERNKRSFYLSAARSAMFNHVASQRVAQSSYQQVMPGDAMQLSGRGSWFVAQPEELES
LQQRLNEGELRVTAPLPGDGELGTQLNAQIFEQQALVDDQTLYALVKRERVEPARRAILV
QPQHMAWQWLDDATVSVNFWLPAGSFATSVVREVMLAVASEDIPEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattatcctggctatatggcgaaccggctgccaccggcgtacttaaaaaattc
ccacaagatttctgcgttaaagaagatctggggtttgaacccgatggtgaaggtgaacac
gtactggtttatttacgcaagactggctgtaatactcagtttgtagccgataatctggcg
cgttttgcaaaagtgtcgggtcgggtagttagttatgccggacttaaagatcgtcatgcg
gtgactgagcagtggttctgcctgcaaatgccggggaaagagacacccgatttcagcgcc
ttctcactggaagggtgtgaggtgctgaaagtggctcgtcatcgccgcaagctacgtatc
ggtactctcaaaggaaatttttttcaactggtgttaagggatatcagtttgaaggatgat
gttgagtcgcgcttacaaaagattcagcactccggagcggccaactattttggtgaacaa
cgttttggccgtcagggtagtaatctggtgatggcagaacgttgggccaacaatgaaatt
agcgtaaaagagcgtaacaaacgtagcttttacctttccgctgctcgcagcgcgatgttt
aaccatgttgccagccagcgagtagcgcaatcgtcatatcagcaagtgatgcccggtgat
gccatgcaactgagtggcagaggaagctggtttgttgcacaacctgaagagcttgaatct
ttgcagcagcggttaaacgagggcgagttgcgagtgacagcaccattaccgggcgacggc
gaactggggacccagttgaatgctcagatttttgagcaacaggcattggttgacgaccaa
acattgtacgcgctggtaaaacgcgaacgggtagagcctgctcgtcgggcgatcttggtt
caacctcagcatatggcatggcaatggttggatgatgccacggtatccgttaacttctgg
ttaccggcggggagctttgctaccagcgtggtgcgcgaggtgatgctagccgtagccagt
gaagatattccggaagaataa
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