Limnobaculum parvum: HYN51_05400
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Entry
HYN51_05400 CDS
T05491
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpv03000
]
HYN51_05400
Transcription factors [BR:
lpv03000
]
Prokaryotic type
Helix-turn-helix
Other families
HYN51_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AWH88042
UniProt:
A0A2Y9TWQ2
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Position
complement(2697438..2698592)
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AA seq
384 aa
AA seq
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MSFYHLDAKLAQDIVDRTMQIIDSNINVMDAKGTIIGSGDINRIGELHEGALLALSQGRV
VEINEAVAASLHGVRPGINLPLRVEGDIVGVIGLTGEPGVLRQHGQLVGMAAEMMLEQAR
LMNMLAQDSRMREALVLNLIRSDELPTSLMEWAQRLGIDLSQPRVVTLIELDSGHLGVDV
SMKELQQLQSLLTVPDRDNLIAIVSLNEMVVLQPALNSHGRWDAEEHRKRVDSLLLRISE
SSRLNVRVASGNYFSGPGCVARSYSTAKATMSVGKQRMPEQHSYYYQDLMLPVLLDSLRG
GWQVNELNRPLAKLKAMDNNGLLRRTLLAWFKHNMHPGATVKSLYIHRNTLDYRLNRISE
ITGLNLKKFDDHMQLYIALQLDDE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttatcaccttgatgccaaactcgctcaggatatcgtcgatagaacgatgcag
attatcgacagcaacattaacgtgatggatgccaaaggaaccattattggcagtggagac
attaaccgcattggtgaattgcatgaaggtgcactactggccctctctcaagggcgagtg
gtagaaattaatgaagcggtagctgccagtcttcatggggttcgccccggtattaatcta
ccgctgagggttgaaggtgatattgtcggggttattggtttgacgggggagccgggcgtc
ctgcgtcagcatggtcaactggttggcatggctgcggagatgatgctggagcaggcaagg
ttgatgaatatgctggcgcaggatagtcggatgcgtgaagcactggtattaaacttgatc
cgcagcgatgaattacccacgtcactgatggagtgggcacagcgcttaggtattgacctc
tcccagccgcgggtcgtgacgttgattgaattggacagtggtcatttgggcgtggatgtc
tcgatgaaagagctgcaacagttgcaaagtctgttaacggttcccgatcgggataacctg
attgccatcgtttctttgaatgaaatggtggtactgcaaccggccttaaatagccacgga
cgttgggatgcggaagaacatcgtaagcgggtcgatagccttttgctgcgtatttctgaa
agcagccgtctaaatgtcagggttgcttcaggcaactatttctccggcccgggctgtgtt
gcccgttcttacagtacggctaaagcgaccatgtcggtaggtaagcagcgaatgcctgaa
cagcatagctactactatcaggatctgatgctgccagtattattggatagcctgcgcggt
ggttggcaggtaaatgaactgaatcgccctctggctaagctaaaagccatggataataac
ggtctgttgcgtcgtacattgctggcatggtttaaacataatatgcatccgggtgcgacg
gtcaaatcgctctatattcatcgtaatactctggattatcgcttgaatcgcatctcggaa
attaccggattaaacctgaagaagtttgatgatcatatgcagttgtatattgcgttgcag
ttagatgatgaatga
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