Limnobaculum parvum: HYN51_06080
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Entry
HYN51_06080 CDS
T05491
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_06080
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HYN51_06080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
RecA_N
AAA_22
Rad51
GvpD_P-loop
ABC_tran
SLFN-g3_helicase
nSTAND_NTPase5
AAA_14
nSTAND3
AAA
NTPase_1
AAA_16
AAA_24
Zeta_toxin
AAA_5
AAA_29
NACHT
Herpes_Helicase
cobW
Viral_helicase1
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
AWH88168
UniProt:
A0A2Y9TWP8
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All DBs
Position
complement(2859622..2861001)
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AA seq
459 aa
AA seq
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MAKPAKRAFVCNECGADYPRWQGQCSACNAWNSITEIRLAAASSSRSDRFSGYAGEGGVS
KVQKLSEISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTMCKLAS
QMKTLYVTGEESLQQVAMRAHRLGLPTEHLQMLSETSIEQICLIAEQEQPRLMVIDSIQV
MHMADIQSSPGSVAQVRESAAYLTRFAKTKGVAIIMVGHVTKDGSLAGPKVLEHCIDCSV
LLDGDSDSRYRTMRSHKNRFGAVNELGVFAMTEQGLKEINNPSAIFLSRGDEITSGSSVM
VLWEGSRPLLVEIQALVDHSMLSNPRRVAVGLEQNRVALLLAVLHRHGGLQMADQDVFVN
VVGGVKVTETSADLALLLSLVSSLRDRPLPEDLVVFGEVGLAGEIRPVPSGQERISEAAK
HGFKRAIVPHANVPKKSIPNMQVFGVKKLSDALRVLEDL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccagcgaaacgagcgtttgtatgtaatgagtgtggggcggattatccgcgc
tggcaggggcagtgtagcgcctgtaatgcctggaacagcattactgagattcgtcttgcg
gctgcctcttcatctcgttctgaccgtttttctggctatgccggagaagggggagtcagt
aaggttcaaaaactgtcagaaattagtctggaagaacttccacgtttttctaccggtttt
aaagagtttgaccgggtattgggcggcggtgtggtgccgggcagtgcgattctgattggt
ggtaatccgggggcgggtaagagtacgttgttgctgcaaaccatgtgtaagctggccagc
cagatgaagactctgtatgtcaccggggaagagtcgttacagcaggtagcgatgcgagcc
catcgtcttggtttgccaacggaacatttgcagatgctgtcagaaaccagcattgagcaa
atttgcctgattgcagagcaagaacagcctcgtctgatggtgattgactctattcaggtg
atgcatatggcggatatccagtcctctcccggcagcgttgctcaggtaagagaaagcgcc
gcctatttgacgcgttttgccaagaccaaaggtgtcgccattattatggtggggcacgta
actaaagatggttcgttggcgggaccgaaagtcctagagcactgtattgactgctcggtg
ttgctggatggtgattctgactcccgttatcgcactatgcgtagccataaaaaccgtttt
ggtgcggttaatgagctgggggtttttgctatgacggagcaaggacttaaagagatcaat
aacccgtcggctattttccttagtcggggagatgagattacttccggtagttcggtgatg
gtgctttgggaaggctcacgccctctgctggtagagatacaggcgctggtggatcactcc
atgttgtctaatcctcgtcgggtagcggtcggccttgaacagaaccgggttgcattgcta
ttggcggtgcttcaccgtcacggtggtttgcaaatggcggatcaggatgtgtttgttaat
gtggtgggtggggtgaaagtcaccgaaaccagtgccgatttggcgctgttgctctcgctg
gtatccagcctgcgggaccgcccattaccggaagatttagtggtgtttggtgaggttgga
ctggcgggggaaattcgcccggttcccagcggtcaggagcgaatttcagaagcagcaaaa
catggctttaaacgcgcgattgttcctcatgcgaatgtgccgaaaaagagtattcctaat
atgcaggtgtttggggtgaagaagctgtcggatgcgttgagggtacttgaggatctttaa
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