Limnobaculum parvum: HYN51_06520
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Entry
HYN51_06520 CDS
T05491
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_06520
Enzymes [BR:
lpv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HYN51_06520
DNA repair and recombination proteins [BR:
lpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HYN51_06520
Prokaryotic type
HYN51_06520
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWH88242
UniProt:
A0A2Y9TXB0
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All DBs
Position
complement(2959315..2960742)
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AA seq
475 aa
AA seq
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MASHLVWFRADLRVHDNLALAAACRSSEVEVLALFIAPVKQWQQHSMAPRQAAFLLSQLN
ALQQSLAKRGIPFIVKPVDDFAASIDAVREVCETHKVTALFYNYQYEFNERQRDAAVEKA
LSHITCQGFDDSVMLAPGSVMTGNHEMYKVFTPFKRAFLRRLREELPECVNPPGVRTKAL
PDKLEPITLDYPQQPFDTDLFAVDEKSALVRLQQFCQDNVEHYDTQRDFPAIDGTSRLSA
CLALGVLSPRQCLQALLKAHPDALEGKIGAVWLSELIWREFYRHLITYHPNLCKHRPFLG
WTDNVQWSNDRAALVAWQQGNTGFPIVDAAMRQLNQTGWMHNRLRMIVASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDSQGVFIRQWL
PALVDVPTEAIHSPWTWADKEQITLDYPRPIVDHKQARNETLAAYDAARKLLLAQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcatctggtctggtttcgcgcagatttgcgtgtacatgataatttggctctc
gccgccgcttgtcgctctagcgaggtggaggtactggcattgtttattgcgccagtgaaa
cagtggcagcaacattcaatggctccgcgtcaggcggcgtttctgttgagtcaacttaat
gctctgcaacagtcgctggcaaagagaggcattccgtttatcgttaagccggtagacgac
tttgccgccagtatcgatgcggtgcgtgaggtctgtgaaacgcataaggtgacggcgctg
ttttacaactatcagtatgagttcaacgagcgacagcgtgatgccgccgttgagaaagcg
ctaagtcatatcacctgccagggttttgacgatagtgtcatgctggcaccgggtagtgtc
atgaccggtaatcatgaaatgtataaggtcttcactccgtttaagagagcctttttacgt
cgattgcgtgaagaactacccgaatgtgttaatccaccaggagtacggacgaaagcgctg
cccgataagcttgagccaattacgttggattacccacagcaaccgttcgatacggatttg
tttgctgtcgatgagaagagtgcattggtcagactacagcaattttgtcaggacaacgtg
gagcactacgacacgcagcgagattttccagccattgatggtaccagccgactttctgcc
tgcttggcattgggggtattgtcgccacgccagtgtttgcaggctctgttgaaagcgcat
ccagatgctctggagggaaaaataggtgcagtctggctcagtgaattgatttggcgagag
ttttaccgtcatctgataacttatcatccgaacttatgtaagcaccgcccctttctaggt
tggactgataatgtgcaatggagcaacgatcgtgcagcattggtggcttggcagcaggga
aataccggttttcccatcgttgacgcggcgatgcgccaactgaatcaaacgggctggatg
cataaccgattgcggatgatcgtcgccagttttttagtgaaagatctgctgatcgattgg
cgggaaggggaacgttactttatgtcgcagcttattgatggcgatttggccgccaataac
ggcggctggcaatgggcggcatcaaccggcaccgatgctgcgccttacttccgcatcttc
aatcctaccacgcagggggaaagatttgacagccaaggggtgtttatccggcaatggtta
ccggcactggtcgatgttccaacagaagcgattcattcaccgtggacttgggcggataaa
gaacagataacgctcgactacccacgcccgatagtcgatcacaaacaggcccgcaacgaa
acgctggcggcttatgacgccgcaagaaaattattattggcgcagtag
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