Limnobaculum parvum: HYN51_08490
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Entry
HYN51_08490 CDS
T05491
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpv03021
]
HYN51_08490 (rpoH)
Transcription machinery [BR:
lpv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HYN51_08490 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SANT_DAMP1_like
KORA
HTH_10
Rv2175c_wHTH
UCR_14kD
HTH_3
DUF6930
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AWH88593
UniProt:
A0A2Y9TXY2
LinkDB
All DBs
Position
complement(3411358..3412215)
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALVPQGSLEAYIRAANTYPMLTADEERELAERLHYDGDLAAAKKLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKQRLGWFNQDEVELVARELGVSSKDVLEMESRMAAQDM
AFDISPDDENENSVVAPAMFLEDKTSDFAESIEDENWDNDAADKLTQAMNGLDERSQHII
RARWLNNDETKATLQELADRYGVSAERVRQLEKNAMKKLRVAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaatgcaaactttggctctggttcctcaaggtagcttggaggcctatatc
agggctgccaatacctatccgatgttaacagcggatgaagagcgtgaactggctgaacgg
ctgcattacgacggcgatctggcagcggctaaaaagctgattctgtctcatttacgtttc
gttgttcacgttgctcgtaactattcaggctatggtttacctcaggctgatttaattcag
gaaggtaacattggtctgatgaaagcggttcgccgttttaatccggaagtgggtgtccgc
ttggtgtcttttgcggttcactggattaaggctgaaattcacgaatacgttctgcgtaac
tggcgtattgtgaaaatcgcaaccactaaggcacagcgtaagctgttctttaacctgcgt
aagtctaagcagcgtttaggttggtttaatcaggatgaagtggagttggttgcccgcgag
ctaggggtttcaagtaaagatgtgcttgagatggaatcccgtatggcggctcaggacatg
gcttttgatatctctcctgatgatgaaaatgaaaatagcgtcgttgcgccagccatgttc
ttggaagataaaacgtcagattttgctgaaagcattgaagacgaaaactgggacaatgat
gccgcggataaattgactcaggctatgaatggtctggatgaacgcagtcagcatattatc
cgtgcccgttggctcaataatgatgagaccaaggcaactttgcaggaactggcagatcgt
tacggtgtttctgccgagcgtgtgcgtcagcttgaaaagaatgcgatgaaaaaacttcgc
gtcgcaattgaagcctga
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