Limnobaculum parvum: HYN51_09225
Help
Entry
HYN51_09225 CDS
T05491
Name
(GenBank) selenocysteinyl-tRNA-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lpv03012
]
HYN51_09225
Translation factors [BR:
lpv03012
]
Eukaryotic type
Elongation factors
HYN51_09225
Prokaryotic type
HYN51_09225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_3
SelB-wing_2
SelB-wing_1_3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AWH88724
UniProt:
A0A2Y9TZB6
LinkDB
All DBs
Position
complement(3579986..3581866)
Genome browser
AA seq
626 aa
AA seq
DB search
MIIATAGHVDHGKSTLLQALTGTSSTDRLPEEKRRGMTIDLGYVFLPLEDGQVLGFIDVP
GHEKFLANMLAGVDGVQHALLVVACDDGIMAQTREHLAILRLVGIPAITVALTKADRVTP
ERVASVKSQITDELSAQGWNDCPIFITAAPQGTGIAELREHLINLYQHQSEDNEAAIHRF
RLAVDRSFTIKGSGLVVTGTAFSGQVSVGDTLWLTGADRPVRVRSIHAQNQPAERAGAGE
RIALNITGDIGKQDVKRGDWLLQQTPPEAGDRVIAVLQCDKPFRHWQSVHLHHSVNHITG
RISLLQEGAVSAGSEVLVELVLDEALLLAENDRIIVRDISARETLGGARVLLLQPPRRGK
RQPEYLEKLAQLGQAQNDMQVLQLRLAEGSLSLNAFGWARQLTDDGLQMLLTASGCKVVG
DTALQQEKVQEFQQRLIDTLRDFHQQHLDQLGVGRARLRRMALPSEPEALVFSLIDMLLA
EKRLSNSRGWLHLPEFSLAFTPDEQAVWQRVEEKFGDDPYWVRDLAVELTLEEQRVRAVL
RKAAQLGHVIAVVRDRYYLSARIRQFADLIRTMHTTQGSTCAADFRDRLGVGRKLAIQVL
EFFDRSGFTRRRGNDHLLRDQGLFLD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgattattgccaccgccgggcacgtagaccacggaaaatccacgttgctgcaagcgctg
accggtacaagcagcaccgaccgcctgccggaagaaaaacgtcgcggcatgaccattgat
ttaggctatgtcttcttaccgctggaagatgggcaagtgctgggttttatcgatgttccc
ggtcatgaaaaatttttagcgaatatgttggcaggggttgacggtgttcagcatgcgctg
ctggtggtggcctgtgatgatggcatcatggcgcaaacccgtgaacatctggcaattttg
cgactggtgggaattcccgctattacggttgccctaaccaaggcggatcgggtaacgccg
gagcgggttgccagcgtcaaaagccagattaccgatgagctaagcgcacagggctggaat
gattgccccatctttattactgccgcgccacagggaacgggcatcgcggagctgcgcgag
catttaatcaatttatatcagcatcaaagcgaagataacgaagcggcgatacaccgtttt
cgtttggcggttgaccgtagctttaccatcaaaggcagcgggctggtggtaaccggaacc
gcatttagcgggcaggttagcgtaggggataccttgtggctgaccggcgctgaccgaccg
gttcgggtgagaagcattcacgcccagaatcagccggctgaacgcgccggtgccggtgag
cgtattgcattaaatatcaccggtgatattggcaagcaggatgtaaaacgcggggactgg
ctattacaacaaaccccgccagaggccggggacagagttattgcggttcttcagtgtgat
aagccctttcgtcactggcagtcggtccatttgcaccactcggttaaccatatcaccggt
cgaatttcgctgttacaggaaggggccgttagcgcgggtagcgaagttctcgtggaactg
gtgttggatgaagccttattgctggcggagaacgatcgaattattgtgcgcgatatcagc
gcccgtgaaactctagggggggcgcgagtgctgttacttcagcctccacgcagaggcaag
cgccagccggaatatcttgaaaagcttgctcaactcggtcaggcacaaaacgatatgcag
gttttacaactgcgtctggcggaaggtagcttgtcccttaacgcgtttggctgggcgcgc
cagttaaccgatgatggactgcaaatgctgttaaccgcatcaggctgtaaagtggtcggt
gataccgctctgcaacaggaaaaagtgcaagagtttcaacagcggctgattgatacccta
agagattttcatcagcagcatttggatcaactgggcgtcgggcgcgccaggctgcgtcgc
atggcgttaccttctgagccggaagcgttggtgttctcgctgattgatatgctgttggca
gaaaagcgcctgagtaatagtcggggttggttacatctgccggaattcagtttggcattc
actccggatgaacaggcggtgtggcaacgcgtggaagagaagtttggcgacgatccttat
tgggtacgtgatttagccgtcgagctgacgctggaagaacaacgggtgagagccgtactg
cgtaaagcggcacagttaggccatgttatcgcggtggttcgcgatcgttattatctgagc
gctcggattcgccagtttgctgatttaattcgcaccatgcacaccactcagggaagtacc
tgcgccgccgactttcgcgaccgattaggggtcgggcgtaagttagcgattcaggttctg
gagttttttgaccgcagcggctttacccgccggcgtggcaacgatcacttactccgggat
cagggattgtttctggattaa
DBGET
integrated database retrieval system
