Limnobaculum parvum: HYN51_11715
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Entry
HYN51_11715 CDS
T05491
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lpv
Limnobaculum parvum
Pathway
lpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN51_11715 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpv03019
]
HYN51_11715 (groL)
03110 Chaperones and folding catalysts [BR:
lpv03110
]
HYN51_11715 (groL)
03029 Mitochondrial biogenesis [BR:
lpv03029
]
HYN51_11715 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpv04147
]
HYN51_11715 (groL)
Enzymes [BR:
lpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HYN51_11715 (groL)
Messenger RNA biogenesis [BR:
lpv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HYN51_11715 (groL)
Chaperones and folding catalysts [BR:
lpv03110
]
Heat shock proteins
HSP60 / Chaperonin
HYN51_11715 (groL)
Mitochondrial biogenesis [BR:
lpv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HYN51_11715 (groL)
Exosome [BR:
lpv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HYN51_11715 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HYN51_11715 (groL)
Exosomal proteins of breast cancer cells
HYN51_11715 (groL)
Exosomal proteins of colorectal cancer cells
HYN51_11715 (groL)
Exosomal proteins of bladder cancer cells
HYN51_11715 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AWH89159
UniProt:
A0A2Y9U0F3
LinkDB
All DBs
Position
441062..442708
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AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVISAVAELKKLSVPCSDSKAIAQVGTISANSDSSVGLLIAEAMEKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPETGAIELESPFILLVDKKISNIREMLPVLEAV
AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTIIIDGVGDEAAIKGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVLKVGAATEIEMKEKKARVEDALQATRAAVEEGVVAGGGVALI
RVAAKIADLQGDNEDQTVGVRVALRAMEAPLRQIVANAGEEPSVVANNVKAGDGSYGYNA
ATEEYGDMIDMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPKDEKLDMGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttaagtttggtaatgatgctcgcgtaaaaatgttacgtggtgta
aatgttctggccgatgcagtaaaagtgactctgggacctaaaggtcgtaacgtagttcta
gataagtcatttggcgcaccaacaatcactaaagacggtgtatccgtagcgcgtgaaatc
gagctggaagacaaatttgaaaatatgggcgcacaaatggttaaggaagttgcttccaaa
gccaatgatgctgcaggtgacggtaccactactgcaactgtactggcccaggcgattgtg
actgaaggtctgaaagccgttgctgcgggtatgaacccaatggatctgaagcgcggtatc
gacaaagcggttatttcagcggtagcagagttgaaaaaactgtctgtaccttgctctgac
tctaaagcgattgcgcaggttggtactatttctgctaactccgattcaagcgttggttta
ctgattgctgaagcgatggaaaaagtaggtaaagaaggcgttatcaccgtcgaagaaggc
accggcctagaggacgagttagacgttgttgaaggtatgcagtttgatcgcggttacctc
tcaccttattttatcaacaaaccagaaacgggtgctattgaactggaaagtcctttcatt
ctgttagtggataagaagatctctaacatccgtgaaatgctgccagtattagaagctgtt
gctaaagcgggtaaaccactggttatcgtcgccgaagatgtggaaggtgaagcattggct
acgctggtagttaacaccatgcgcggtatcgtaaaagtggctgctgtcaaagcacctggt
tttggcgatcgtcgtaaagccatgttgcaagacattgcgactttgactggcggtacggtt
atttctgaagaaatcggtttagagctggaaaaagcgactctagaggatttaggtcaggca
aaacgcgttgttatcaacaaagatactaccatcatcattgatggcgttggtgacgaagcc
gctattaaaggccgcgtaacgcaaattcgtcagcaaattgaagaagcaacttctgactac
gaccgtgaaaaactgcaagaacgcgtagctaaattagctggcggtgttgctgtgctgaaa
gtgggcgctgcaactgaaattgaaatgaaagagaaaaaagcgcgtgtagaagatgctctg
caagcgactcgcgcagcggtagaagaaggtgtggttgctggtggtggtgtagcattaatt
cgcgttgctgcgaaaattgccgatctgcagggtgataatgaagatcaaaccgttggtgtc
cgtgttgcgttacgcgcaatggaagcaccattacgtcagatcgtggctaacgccggtgaa
gaaccttctgttgtggcaaataacgtgaaagccggtgacggtagctacggttataacgca
gccactgaagagtatggcgatatgatcgatatgggtattttggatccaaccaaagtaacc
cgttctgctctgcaatacgctgcttcaatcgccggtctgatgatcacgactgaatgtatg
gtgactgatttaccgaaagatgaaaaattagacatgggtgctgctggtggtatgggcggc
atgggtggtatgggcggaatgatgtaa
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