Limnobaculum parvum: HYN51_11830
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Entry
HYN51_11830 CDS
T05491
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lpv
Limnobaculum parvum
Pathway
lpv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HYN51_11830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpv03019
]
HYN51_11830
03009 Ribosome biogenesis [BR:
lpv03009
]
HYN51_11830
Messenger RNA biogenesis [BR:
lpv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYN51_11830
Ribosome biogenesis [BR:
lpv03009
]
Eukaryotic type
Pre-60S particles
RNases
HYN51_11830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWH89180
UniProt:
A0A2Y9U076
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All DBs
Position
465202..465747
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AA seq
181 aa
AA seq
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MSGNENNLIWIDLEMTGLNPEINRIIEIATIVTDANLNILAEGPVFAIHQTDEHMALMDE
WNTTTHTASGLVTRVKQSAFDEQAAEQKTIEFLQQWVPQGCSPICGNSIGQDRRFLYRYM
PELERYFHYRYLDVSTLKELARRWKPEILSGITKQSTHQALDDIRDSIAELAYYRENFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaatgagaataacctgatttggatcgatctggaaatgaccggtttaaatcct
gaaatcaatcgcatcatcgaaatcgccactattgtgaccgatgctaacttgaatattctg
gcggaagggccggtttttgcgattcatcaaacggatgaacatatggcattgatggatgag
tggaacaccactactcataccgcaagtgggctggtgacgcgggtaaagcagagtgctttt
gatgaacaggccgccgagcaaaaaaccattgaatttttacagcaatgggtgccccaaggg
tgttcacctatttgtggtaacagtatcggtcaggatcgccgctttctttatcgttatatg
ccagagctggaacgttatttccactatcgctatttggatgtcagtacgttgaaagagctg
gctcgtcgctggaagccggagatattgtctggtattaccaagcagagtactcaccaagcg
ctggatgatatacgcgattcaattgcggagctggcttactaccgtgagaactttattaag
ctgtaa
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