Limnobaculum parvum: HYN51_12605
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Entry
HYN51_12605 CDS
T05491
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
lpv
Limnobaculum parvum
Pathway
lpv00550
Peptidoglycan biosynthesis
lpv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYN51_12605 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lpv01003
]
HYN51_12605 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpv01011
]
HYN51_12605 (pbpC)
Enzymes [BR:
lpv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HYN51_12605 (pbpC)
Glycosyltransferases [BR:
lpv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HYN51_12605 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
lpv01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HYN51_12605 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
AWH89314
UniProt:
A0A2Y9U143
LinkDB
All DBs
Position
complement(646868..649258)
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AA seq
796 aa
AA seq
DB search
MGSRVVDAIRRQLQPATLKRHLQNLLMGVFLLALFCIGFRLWPHPPLSQGLPLSTAYYDR
QGTLLRFSLANDDRYRLWTKLEDISPLVVEGIQLHEDRWFNYHPGFNPYSLIRGFWISYI
SGGRQQGGSTLTMQLARMHWQLNTKTPQGKLVQIVRAIQLELSYSKRDILEAYLNYAPYG
RNIESIGAASLIYFDKQPNNLTLPEALTLAVLPQSPSYRININTGIVGEALTKARNQLYQ
RWQLEHHPDNTMSALFLLPLSLRQPEKLPFIAPHFVEQIQQDKQYRAMVDQRIITTLDSN
LQLLVEKQVNAFIERNQSKGIHNSAVLLVDTRDMGIRAMVGSADYHNRKIQGQVNGTSAK
RSPGSTLKPFIYALGLEQGILQPMTILKDVPSSFGAYTPENFDRRFLGPISATDALNYSR
NIPAVYISSRLKQPNLYQFLQLAGVSNLASEKHYGLSLILGGGEITPQELARLYSMLANR
GELKPLRLEQSAPIASSVRLISNEASFITLDMLSQHRRPGDTLAQQPTSLPIYWKTGTSW
GFRDAWSAGIFGPYVLIVWQGNFDGKGNNAFIGADAAAPLFFNIIDSIRADYPMLKEPNR
GLPPNIKQVEICLASGDLPTSWCQRKGKTWFIPGKSPIKVDSVYRPVVIDKATGQVACPP
YRDEDVTTEIFEFWPSDLANVFALAGLPKRTPPSSAHCKIGGTVTTGQAPRITSPLRNTT
YTLRNVKQRNDPIVFSAITDADTKVVYWFVDDIYLGNTANKRTIEWRPATSGHYRIRAID
DRGRADSRTLNVELIN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccgagtagtcgatgccatacgcaggcaactacaaccggctacccttaagcgc
cacctgcaaaaccttctgatgggcgtgtttctgttggcgctgttttgtatcggttttcgc
ctttggcctcatccccccctttcccaaggcttaccgctttctaccgcctattacgaccgt
caggggacgctactgcgtttttctttggctaatgatgaccgctatcgcctgtggactaag
ctggaagatatttcaccgttggtggttgaaggcattcaacttcatgaagaccgctggttt
aattaccatccggggtttaacccttacagtctgatccgtggtttttggatcagctatatc
agcggaggacggcagcagggtggctctacgctaaccatgcagttggcccgcatgcactgg
cagctcaacacgaaaaccccacagggtaagctggtgcagattgtgcgtgccattcagtta
gaactcagctattcaaaacgcgatattctggaagcctatctgaactacgctccctatggc
cgcaatattgagagcatcggtgctgcaagccttatctactttgataaacaaccaaataac
ctgacgctaccagaagcgctgacccttgccgtgttaccccagtctcccagttatcgtatt
aatatcaacactggcattgttggcgaggcattaaccaaagcacgtaaccagctttatcag
cgttggcaattagagcatcatccagataacacgatgtcagccctgtttctgttgcctcta
tctttgcgccaaccagaaaaactgccctttatcgcacctcattttgtcgagcaaatacag
caggataaacaatatcgggcaatggtcgatcaaaggattattaccacactggacagcaat
ttacagctgctggtagaaaagcaggttaacgcctttattgagcgcaatcagagtaaaggg
atacacaatagcgccgttctgctggttgatacgcgggatatggggatcagagccatggtt
ggatcagctgattaccacaaccgaaaaattcaggggcaggtcaatggaaccagcgccaaa
cgctcccccggctcaacgctcaaaccgtttatttatgccctcggtctggaacaaggcatt
ctccagccgatgaccatactgaaagatgtaccctcatcttttggcgcttatacaccggaa
aatttcgatcgccgctttcttggaccgatttcagccacggatgcactaaactacagccgc
aatatacccgccgtttatatctcttcacgcctgaaacagcctaacctctaccaatttcta
cagttggctggtgtgtcgaatctagccagtgaaaaacactatggcttatctttgattctc
ggtggtggcgaaattaccccgcaggaactggccagattgtattccatgctggcaaatcgc
ggtgagctaaagcctttgcgtctggaacaatccgcccccatcgcttcatcagtgcgtctg
ataagtaatgaggccagttttatcacgctggatatgctgagccaacaccgcaggccgggt
gatacgctggcccaacagcctacctcgctgccgatttactggaagaccggtacctcatgg
gggtttcgtgatgcatggagcgccgggattttcggtccctatgttttgattgtctggcag
ggtaattttgatggtaaaggcaataatgcttttatcggggcagatgcagcagcaccgctg
ttttttaatattatcgatagcatacgggctgactatccgatgctaaaagaacccaaccga
ggattaccaccgaatatcaaacaggtggaaatttgtttagccagcggtgatttacccacg
tcttggtgccagcgcaaaggaaaaacttggtttatccccggtaagtcgcccattaaagtg
gattcggtttatcgacctgtcgttattgataaagccaccggtcaagttgcctgcccgcct
tatcgggatgaggatgtcaccaccgaaatttttgaattttggccttctgatttagccaac
gtatttgcgctggcaggcttgcccaaacgtactcctccctcttccgcccattgtaaaata
ggaggaaccgttaccaccgggcaagcgccacgcattacttctccattacggaacaccacc
tacacgctgcgaaatgttaagcaacgtaacgatcctatcgtttttagcgctattaccgat
gccgataccaaagttgtttactggtttgttgatgatatctacttggggaataccgccaat
aaacgcaccattgagtggcgaccagcgaccagtgggcactatcgcatacgcgctatcgac
gatcgaggacgagcagactccagaacactgaacgttgagctgatcaactaa
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