Limnobaculum parvum: HYN51_12960
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Entry
HYN51_12960 CDS
T05491
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
KO
K15125
filamentous hemagglutinin
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lpv00536
]
HYN51_12960
Glycosaminoglycan binding proteins [BR:
lpv00536
]
Heparan sulfate / Heparin
Microbial pathogens
HYN51_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
PT-VENN
ESPR
Fil_haemagg
T4SS_pilin
Motif
Other DBs
NCBI-ProteinID:
AWH89378
UniProt:
A0A2Y9U018
LinkDB
All DBs
Position
734378..743026
Genome browser
AA seq
2882 aa
AA seq
DB search
MNKNLYRVIFNQARGQLMVVPEIAGAHTAGGTPRASSGGGHPLSQLIAGLKPLTLLTSLA
LGLMTISLPAQADIVADHSAPGNQQPTVISSANGTPQVNIQTPSDAGVSRNTYSQFDVDN
RGAILNNSAAPVQTQLGGYVDGNPQVIRGGAKIILNEVNSRDPSQLNGYVEVAGQKAQVV
IANPSGITCDGCGFINANRATLTTGTPNLVNGQLEGYNVQQGNVTIQGRGMDSSQQSYTD
IIARSVRVNAGVWANELNVVTGKNKVSADTSQIEKQGGNEAGSPQFSVDVAVLGGMYANS
IRMVGTENGVGVHNAGHIGTQAGSVVVTTDGRIENSGTMSSAQDLTLSTPESLTNSGTLF
GKNTVQINAQGDIVNTAAGQMGTNGQLDVTTQGSLTTQGVMAADGNTTVSSRRGLNNGGT
VSAGQTLRVSGASIDNSGTLQGKGRTAISTPGYINQTASGKISSTGFLSLDSGDWMTSYG
SIYSADAASISVQNALFNGGTLDTGLGLTLSASHINNAGAIYAGSDVQAQSRSDLLNSGT
LGSDRDITLNAAGAFASSNTLYAKGDVRLAAGSTVSNNGTLAADGHLSLTTPGALNNNGT
LYSKGNLTLSADQSVTSYGGIGADGELSLSTDGTLFNNQMLYGKGQTTLKTGGDVTNLGV
IGSDSRLSLTTPGNLLNTGTLYSGGPMTVTTNGRITNGGTVNSGSDLILTGQNSLYNGNT
IYAKGHANLNISGAVTNDGTIGADRNLTLKAGEDTLNNGTLYSQGAGKYLTEGSFTNNRL
LRSEDTLSVEVGGSLLNDADIYASAGLDFSAGQRMDNHAQIYSGGALNLHAIGDISNTSV
LAAFSDMTLSTTHFSNGSNALLASGVQSNGQRVNTGDITLVSAQPADLQGQVLASGTFNV
DANGINLADGLVSAGAMNLQGHGGEINTDRAQLYVNNAFTAQTTGHWSNLGGQLYAGDMQ
LKAGSLTNDAAGIISAQSTNLTLNGLLSNRGLIDGLLTRLQASQIDNYGTGRIYGTWLGL
QADVINNREEGSTAATIAGRETLDMGAGTLNNYTHSLIFSGGNMSIGRLLDDNGNATGMG
GTLNNHSATIEALGDLRLSVGVVNNVNDHFSTEVREISREDFHDFTLKGSVNRYTLNELS
FYKDGNGIKNILSPENPTWGKDNFYEYIYTRITKETVISETDPAKILAGGNLLMTADTVN
NDKSQIVAGNVLNIAANTLNNTEVTGTRTIDEIGKVTHWSRQRRSGKDKQKKPTTDYIPA
QVVQSITLKPSETLSNTLPNGSGTSIAGRQEGITPNANINGINIERVNIQLPGEDGMKDV
GVVTRPPSLNLTLPNASLYKVNPAVGSRYLIETDPQYTQLKRWLGSDYMTSRLKADPNNM
HKRLGDGYYEQTLIREQVINLTGQRFLNGYANDEEQYMALMNSGVEFAQKYPLSLGIALT
PEQMANLTSDIVWLVSRDVTLPDGSVQTVLVPQVYAMIRPQDIDGSGALLSGKQVNLQLT
NDLVNQGRILAGDKLNVLAQNIQNQGGSISGNNVMLLANNDINNIGGLMQGFDSLRLQAG
HDINLITTTTQGEKAGRNGSSHTAINQVAALAVNNDNGTLQLSAGHDINLTAALLSNAGQ
NSDTTIEAGHNLNLSTVTEEKQRSYVWDKDNYRHEGSSQDVGTQITGGGNITLAAKNDVN
ARASQVESGGQLAVVAGNDINIMAGQSSAHLDEHTKSSGKGGGGMTKVTNESHSKLDYQY
AESSRFDGNSVVMNAGNNLLVHGSEVIATNDLTLKAGNNLTITSAQETSDERRMERETRS
GLMGSGGIGFTVGKIDEKSTNTVHGISNVGSTIGSTNGSVSLSAGNNLAVKGSDVVAQQD
ISLTGKNVTVESVENQTHIQDKYERTQSGVTVALSGAVGGALNAAVTEAKQAQETHDSKI
KALQEIKAALSAVQAVQAGMMDLPKDSEGFVGISISGGAQRTESTTDTKIRAAQGSTIAA
GNNLSITATGNGEKGVDGDITLKGSAINAGNNMLLDANRDVNLLASANTQKTDSENKSYG
GNAGVSFGIGGGKNGLRFFADANFSQGNMHADGLYWTESQLEAGNNLTIISGRDTNLIGA
LAKGDSVTMDVGRDLTVRSLQDTDDYSYEQYSLNIAGSYGTGFDGSLGFTMDKMDSTWAS
VNEQSGIYAGQGGYDITVGKHTQLDGAVIASEATPELNNLDTGTLGWSDIKNRADYDVSH
VSMSIGSGGGAPFGFPGVPGTPIVVAYGDSASSTTHAAIADGNITIRDQNNQQQDISRIS
HDTENAANPLDKIFDADEQMRNLEAIGLAGQIVSQVTTIATNIGVKAAQDEAHAKADAQK
DSAANDPAIIAQARADLSKAGNDNPTQEELNKATYDVVYQAEFKIANKAQMEKYGTGSDV
QRAIQAAGAALTVAMGGGSVGNAAAAASAPYLAQGVKVLTEGPEMKDKAINAIAHAIIGA
AVAQGSGNSAASGAIGAASGEIIAQTITQYLYEGKKPEELTEEQRQAVAALSMIASGAIG
GVVGDSTESAATSANAGYNAAVNNHLTTGEKQVLDRKEKEYASTCQGGNAGSGACQELKQ
DIDKLKEKGSSIDKVEENEFGPDFQLAGTEQIDHKPGDVVSCVGSSNGFCVVTEQSTSNG
KEWILAEANEVQAIAAKHQNGDAEAFIKELGAAYFNAGCGTPGGLGISAVCQTYSAAGGA
NPIDGKVPTDGDRLLWAMEAATNTAGTVLTINQSLSLNYKANIAEHLANFDGFTQSRGIK
GGHNANSFYDSVKQYGVQIVSETPTGTPGITTIEYRIPAKHPQTGEITHYKGDGSEPFKK
TIYDPKIFTDQKMLTLGKQAAAKAYKDAMLSPKGIADATVGGVTFRVYVDKATGVVRNFH
PK
NT seq
8649 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatttataccgcgtaatttttaaccaagcgcgtggtcagttaatggtggta
ccggagattgccggtgcccacactgcggggggaacgcctcgcgcgtcgtctggcggcgga
catcccttaagccaactgattgccggtcttaaaccgctgacgctgttgaccagcctggcg
ttaggcctgatgaccattagcctgcccgctcaggcggatatcgtggcggaccacagcgcg
ccgggcaaccagcagcccacggtcatcagcagcgcgaacggcacaccgcaggtcaatatt
cagactcccagcgacgcgggcgtatcgcgcaatacctacagccagttcgatgtggataac
cgtggcgctatcctcaataactcagccgcgccggtacaaacccaactgggcggctatgtt
gacggtaacccgcaggtgatacgcggcggggccaaaatcattcttaacgaagtcaattcc
cgcgacccaagtcagcttaacggttatgtggaagtggcggggcaaaaagcgcaggtggtc
atcgccaacccgtcaggcattacctgtgacggctgtggttttattaacgccaaccgcgcc
acgctgactaccggtacgccgaatctggtcaatggtcaactggagggctacaacgtccaa
cagggcaatgtgaccattcagggccgaggcatggacagcagccagcaaagctataccgat
attattgcccgctcagtgcgtgtgaatgcgggcgtctgggccaatgagcttaacgtcgtc
accggtaagaacaaggtcagtgccgataccagccagattgaaaaacagggcggcaatgag
gcgggcagccctcaattctccgtggatgtggcggtgctaggcggcatgtacgccaacagc
attcgcatggtgggtaccgaaaacggggtgggggttcacaacgcggggcatatcggtacg
caggccgggtcggtggtggtgacaaccgacgggcggattgagaacagcggaacgatgagc
agcgcccaagacctgaccctctctacgccggaaagcctgactaacagcggaacgctattt
ggtaaaaatacggttcagattaacgcgcagggggatatcgttaacaccgccgctgggcaa
atggggactaacggacagcttgacgtcaccacgcagggtagcctgaccacgcaaggcgtg
atggcggcggatggcaacaccacggtgagcagccgtcgcggcctgaataacggcggaact
gtctctgccggtcagacactccgggtctcgggcgccagcattgataacagcgggacgttg
cagggcaaagggcgcactgccatcagcacaccggggtacatcaaccagaccgccagcgga
aaaatcagcagcacgggctttttaagcctcgacagcggcgactggatgaccagctacggc
agtatttactcggcggacgcggcttcgatttcagttcaaaatgccctgtttaacggcggg
actctggataccggactggggctgaccctgtcggccagccatatcaacaacgccggggca
atttatgccggtagcgatgtgcaggcgcaaagccgcagcgacctgctcaatagcggaacc
ctcggctctgaccgggatatcaccctgaatgcggcgggagcgtttgccagcagcaatacg
ctgtatgctaaaggcgatgtgcggttagcggcgggcagcaccgtcagtaataacggaacc
ttggcggcagatggtcatctgagcttaaccaccccgggcgcgctgaacaataacggcacg
ctgtacagtaaaggcaacctgaccttaagcgcggaccagtcggtgaccagctatggtggc
atcggtgctgacggcgaactgagtctgagcaccgacggaacgctgtttaataaccaaatg
ctgtacggcaaaggccagactaccctgaaaaccggtggcgatgtcaccaacctcggggtg
ataggctcggatagccgattgtccctgaccaccccgggcaacctgctgaataccggcacc
ctgtatagcggtggcccgatgacggtcacgaccaacggtcgcatcaccaacggcggcacc
gtcaacagcggcagtgatttaatcctgactggccaaaattccctgtataacggcaacacg
atttacgccaaaggccatgcgaacctcaatattagcggcgcggtcaccaatgacggcacc
atcggcgctgaccgtaacctgacgctcaaggccggtgaggacaccctcaataacggcacg
ttgtacagtcagggcgcggggaaatacctcaccgagggcagctttaccaacaaccgcctg
ctgcgcagcgaagatacgctgtcggtggaggtgggcggcagtctcctcaatgacgcggat
atctacgcgtctgccgggcttgatttcagcgccggacagcgcatggataaccatgctcag
atatacagcggcggggcactgaacctgcacgccatcggggatatcagcaacacctcggtg
ctggcggcattcagcgatatgacgctgtcgaccacccactttagcaatggcagcaatgcg
ctgttggcctccggtgtacaaagcaacggtcaacgggtcaataccggtgatatcaccctt
gtcagcgcacagcctgcggatttacagggccaggtcttggcctctggcacctttaacgtg
gatgcgaacggcatcaatctggctgacggactggtgagcgcgggcgcgatgaatttacag
gggcacgggggtgagataaacaccgaccgggctcaactttacgtgaacaatgcgttcact
gcacaaaccaccggtcactggagcaaccttggcggtcagctgtacgccggtgatatgcag
ctcaaagcggggtcgttgaccaacgatgcggcggggattatcagcgcgcagtccaccaac
ctcaccctgaatggcctgttaagcaaccgggggctgattgatgggctattgacccgttta
caggccagtcaaatcgataactatggcaccggtcgcatttacggcacgtggttggggtta
caggcggatgttatcaacaaccgggaagaaggcagcacggccgccactatcgccggtcgt
gaaacgctggatatgggcgcaggaaccttaaacaactacactcattcgctgatattcagc
ggcggtaatatgtccatcggccgattgttggatgacaacggcaacgccaccggtatgggt
ggaacgttgaataaccacagtgcgaccatagaagcattaggggatttacggttgtcggtg
ggagtggtgaataatgttaatgaccactttagcaccgaagtgcgtgaaatttcgcgcgaa
gattttcatgattttactctcaaagggtccgtcaaccgctataccttaaatgaattgagt
ttctacaaagacggtaacggcatcaaaaatatcctctcaccagaaaaccctacctggggt
aaggataacttctatgagtacatctacacccgtataaccaaagaaacggttatcagcgaa
actgacccggctaaaattttagccggtggtaatttgctgatgactgcggatacggtgaat
aacgataaaagccagatagtggcaggtaacgtacttaatattgcggccaacaccttgaat
aacacggaagtgaccggcactcgtacgatagatgaaattggtaaagtgacgcattggtcg
cgtcagagaaggagtggtaaagataaacaaaaaaagccgaccaccgattatattcctgca
caggtagttcaatccatcacgctaaaaccgtctgaaaccctgagcaatactctacccaac
ggtagtggaacatcaattgccggtcgtcaggaaggtatcacgccaaatgccaatatcaat
ggtatcaatattgagcgggtaaatattcaactgccgggtgaggacggtatgaaggatgtc
ggcgtggtgacccgtccaccgagtctgaatctgacattaccgaatgccagcctgtataaa
gtcaatccggcggtaggtagtcgctatttaatcgaaaccgaccctcaatatacccaactt
aagcgctggctgggttcggactatatgaccagccgtttaaaggctgacccgaacaatatg
cataagcgtttaggcgatggttactatgagcagacgcttatccgtgagcaggtcatcaac
ctgaccggacagcgctttttaaacggttacgccaatgacgaagagcaatatatggcgctg
atgaacagcggcgtggagtttgctcagaagtatcctctgtcattaggtatcgcgctgacg
ccagagcagatggctaacctgacttcagacatcgtctggctggtcagccgtgacgtgacc
ttaccggatggcagtgtccagacggtattggtgccgcaggtgtatgccatgattaggccg
caggatattgacggcagcggtgccttgttatctgggaaacaggttaacttgcaactgacc
aatgatttggtgaatcaggggcgcattctggcgggggataagctgaatgtgctggcgcag
aatattcaaaatcagggcggtagcatcagcggcaataatgtgatgttgctggcgaataac
gatattaataatatcggtgggttgatgcagggctttgacagcctgaggcttcaggccggg
catgatattaacctcatcaccaccaccacgcagggagaaaaggcgggtcgcaatggctct
tcccatacggctatcaatcaggtggcagcccttgcggttaataacgacaacggcacatta
cagctttcggcgggtcacgatattaatctgacggcggcgctgctgagcaacgcgggtcag
aacagtgatacgaccatcgaggcgggtcataatctgaatctgagtaccgtgacggaagag
aagcagcgcagttatgtctgggataaggataactatcgtcacgagggaagttcacaggat
gtcgggacccaaattaccggtggtggcaatatcacactggcggcgaaaaatgacgtcaat
gccagagcatctcaggtagagtcaggcggtcaactggcggttgttgccggaaacgatatt
aatattatggcaggtcagtcatcagcgcatctggacgagcatactaaatccagtggcaaa
ggtggtggtggtatgactaaagtcaccaatgagtcgcacagtaagctggattatcagtat
gctgaaagcagtcgctttgacggtaacagtgtagtgatgaatgccggtaataacctgttg
gttcacggaagtgaagtgattgccaccaatgacctgacgctgaaagcgggtaataacctg
accatcaccagtgcacaggagaccagtgatgaacggcggatggagcgtgaaactaggtcc
ggcctgatgggcagtgggggcattggctttaccgttggtaagatagatgaaaaatccacc
aatactgtccacggtatcagtaatgtagggagtaccattggcagcactaacggtagtgtc
agtctgagcgcaggaaataatctcgcggtcaaaggctcagacgttgtcgcccagcaagac
atcagcctgacgggtaaaaacgtcaccgttgagtcagtggaaaaccagacccacattcag
gacaagtacgaacgtacccagtcgggcgtgaccgttgcgctgtctggtgcggtgggtggt
gcactgaatgcggcggtgaccgaagcgaaacaggcgcaggaaactcacgacagcaaaatc
aaggcgctacaggaaatcaaagcggcgctgtcggcggtgcaggccgtacaggccgggatg
atggacttgcccaaagacagcgaagggtttgtgggtatcagtatttcgggcggtgctcag
cgtactgaatccaccaccgacaccaagatacgggcggcacagggttcgaccattgcggcg
gggaataatctgtcgattaccgccaccggtaacggtgagaaaggggtggatggcgatatc
acccttaaaggctccgccatcaatgcggggaataatatgttgcttgacgccaaccgggac
gttaacctgctggcctcggcgaacacccagaaaaccgacagtgagaacaagagctacggc
ggtaacgccggggtcagttttggtattggcgggggtaaaaacggcctgcgcttctttgcc
gatgcgaacttttcccaggggaatatgcatgcagacggtctgtactggacggagagtcag
cttgaggccggtaataacctgaccatcatcagcggtcgggataccaatctgattggtgca
ctggcgaaaggggattccgtcacgatggacgtgggtcgtgacctgaccgttcgttcattg
caggacaccgacgattacagctacgagcaatactcactgaatattgccggcagctacggc
accggtttcgacggcagtctgggcttcacgatggacaagatggacagcacgtgggccagc
gtcaatgaacagagcgggatttacgcgggtcaaggcggttatgacattaccgtcggtaag
cacacccagttagacggggcggtgattgcctcggaagccacgccagaactgaacaatctg
gacaccggcacgttgggttggagcgatatcaagaaccgagcggattatgacgtcagccat
gtgtcgatgagtatcggctcgggcggtggtgccccgtttgggttcccgggcgtaccgggt
acgcctatcgtggtggcttacggcgatagcgccagtagcacgacccatgcggcgatagcg
gatggcaatatcactattcgcgaccaaaacaatcagcagcaagacatcagccgtatcagt
cacgatacggagaatgccgccaatccgctggataagatttttgatgccgatgagcagatg
cgaaatctggaagcgataggtctggcggggcagatagtgtcgcaggtgacgaccattgcg
accaatattggggtgaaggcggcgcaggatgaggcacatgctaaggcggatgcacaaaaa
gactcagcggcgaatgacccggccatcattgcacaggcgagagccgatttgtctaaagcg
ggtaacgacaatccgacgcaggaagagctcaataaagccacctacgatgtggtgtatcag
gctgagtttaagattgccaataaagcgcagatggagaagtacggcacgggcagtgatgta
cagcgggctattcaggctgcgggtgccgcactgacggtagcgatgggcggtggtagtgtt
gggaatgcggctgcggcggcttcagcaccttatctggctcagggcgtgaaagtgctgacc
gaagggcctgaaatgaaggacaaggccattaacgcaattgcacatgcgattatcggtgcc
gcagtggctcaggggagtggtaatagcgcggcttccggagctattggtgccgccagcggt
gaaatcattgcacagaccattacgcaatatctgtacgaaggtaaaaagccggaagaacta
acagaagagcagcgtcaggcggttgctgcgttgtcgatgatagcatcgggcgcgattggt
ggtgtggtcggagatagtactgaatcggctgccacttctgctaatgcagggtataacgcg
gcggtcaataaccacctgacgacaggtgaaaaacaggttcttgatcgtaaagagaaggaa
tatgcctcaacctgtcaggggggcaatgctggaagtggtgcctgtcaggagctgaagcaa
gatattgataagctgaaagagaaaggcagcagcattgataaagttgaagagaatgaattt
ggccctgattttcaacttgctggcacggagcaaattgaccacaaaccgggcgatgttgtt
agctgtgtaggctccagtaatgggttctgtgttgttaccgagcaatcaaccagcaatggc
aaagaatggattttagctgaggctaatgaggttcaggccattgcggctaaacatcagaat
ggagatgcagaagcatttattaaggagctgggtgcggcttactttaatgcagggtgtggt
actccaggggggcttggtatatctgccgtatgtcagacatactctgcagcgggtggtgca
aacccgattgatggcaaggtgcctacggatggcgatcggttgctgtgggcgatggaggcg
gcaacaaatactgctggtacagtgttgacaatcaaccagtccctcagtctgaattataag
gctaatatcgctgagcatctggccaattttgatggttttacacagagtagagggattaaa
ggtgggcataatgcgaattcattttatgattctgtgaaacagtatggtgtacaaattgtt
agcgaaactccaacgggaacaccaggaattactacaatagaatatcgaatacctgctaaa
catcctcaaacaggtgaaattactcattataaaggtgatgggagtgaacctttcaaaaag
actatttatgatcctaagatatttactgatcagaaaatgttgacgctaggtaaacaggct
gcagcaaaagcatataaagatgcaatgttgagccctaaaggaatagctgacgctactgta
ggcggagtaacgtttagagtatacgtcgataaggcaaccggcgttgttagaaacttccac
ccaaaatag
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