Limnobaculum parvum: HYN51_12985
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Entry
HYN51_12985 CDS
T05491
Name
(GenBank) DUF3990 domain-containing protein
KO
K15125
filamentous hemagglutinin
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lpv00536
]
HYN51_12985
Glycosaminoglycan binding proteins [BR:
lpv00536
]
Heparan sulfate / Heparin
Microbial pathogens
HYN51_12985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
DUF3990
PT-VENN
DUF6862
Motif
Other DBs
NCBI-ProteinID:
AWH89383
UniProt:
A0A2Y9U075
LinkDB
All DBs
Position
746886..751706
Genome browser
AA seq
1606 aa
AA seq
DB search
MKDVSVVTHPPSLNLILPNASLYKINPAVGSRYLIETDPQYTQLKRWLGSDYMTSRLQAD
PNNMHKRLGDGYYEQRLISDQIINLTGQRFLNGYANDEEQYMALMNSGVEFAQKYHLSLG
IALTPEQMANLTSDIVWLVSRDVTLPDGSIQTVLVPQVYAMIRPQDIDGSGALLAGKQVN
LQLTGDLVNQGRILAGDKLNVLAQNIQNQGGSISGNNVMLLANNDINNIGGLMQGFDSLR
LQAGHDINLITTTTQGEKAGRNGSSHTAINQVAALAVNNDNGTLQLSAGHDINLTAALLS
NAGQNSDTTIEAGHNLNLNTVTEEKQRSYVWDKDNYRHEGSSQDVGTQITGGGNITLAAK
NDVNARASQVESGGQLAVVAGNDINIMAGQSSAHLDEHTKSSGKGGGGMTKVTNESHSKL
DYQYAESSRFDGNSVVMNAGNNLLVHGSEVIATNDLTLKAGNNLTITSAQETSDERRMER
ETKSGLMGSGGIGFTVGKIDEKSTNTVHGISNVGSTIGSTNGSVSLSAGNNLAVKGSDVV
AQQDISLTGKNVTVESVENQTHIQDKYERTQSGVTVALSGAVGGALNAAVTEAKQAQETH
DSKIKALQEIKAALSAVQAVQAGMMDLPKDSEGFVGISISGGAQRTESTTDTKIRAAQGS
TMAAGNNLSITATGNGEKGVDGDITLKGSAINAGNNMLLDANRDVNLLAAANTQKTDSEN
KSYGGNAGVSFGIGGGKNGLRFFADANFSQGNMHADGLYWTESQLEAGNNLTIISGRDTN
LIGALAKGDSVTMDVGRDLTVRSLQDTDDYSYEQYSLNIAGSYGTGFDGSLGFTMDKMDS
TWASVTEQSGIYAGQGGYDITVGKHTQLDGAVIASEATPELNNLDTGTLGWSDIKNRADY
DVSHVSMSIGSGGGAPFGFPGVPGTPIVVAYGDSASSTTHAAIADGTLTIRDQNNQQQDI
SRISHDTENAANPLDKIFDADEQMRNLEAIGLAGQIVSQVTTIATNIGVKAAQDEAKASM
EAASKDPAIQAQARENLAKQDIENPTQEQLNKATYDVVYQAAYEEQMKTYGTGSNVGRAI
QAAGAALTVAMGGGSAGNAVAAASAPLLAQGVKRLADDNFPVDKEHPDNANLFAKVIGHA
IVGLAVAEGSGNSGMAGALGAASGELIAKTIAEEYYKTDPEKLTEAQRQFIANMTSIATG
VAAGLVADNTADAGMAASAAYNSATNNYLSQSEKTDLDLAKQKLNDPDPLVREKARQDYD
QLMEKDISSDQAVIDACGNGQAGSAGCASARQDAAAARDSYETGSYNSQAKKQYADAYGQ
IVSLLNSTTVDAEHKEQVTDGLARYFMAVTGVDYETARGYADTKQGMDILVASLALKDNL
QAAHSYLAAEGAVSQANAAKSASKTSYNWSSGEGAFSPKSNGKIVDVEYPGGKYDGNSLP
YGKTPVIEEKGNEIVTFYHGASSENASLIKTNGINLSAGNPQADFGRGFYMTTSKEEALM
SAGRIFKGAGVYDVVEFNVPIQEIKTLSALEFKSANETWQDFVRFHKENGPDELLHAGKP
YDLVTGPLFRRESKGGAIPWDNRLPQTSIHTEKAVDLFNIYMNKDK
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtcagcgtggtgacccatccaccgagcctgaatctgatattacccaatgcc
agtctgtataaaatcaatccggcggtaggtagtcgctatttaatcgaaaccgaccctcaa
tatacccaacttaagcgctggctgggttcggactatatgaccagccgcttacaggctgac
ccgaacaatatgcacaaacgtctgggggatggttactatgagcagcggctgattagcgac
cagataattaacctaaccggacagcgctttttaaacggctacgccaatgacgaagagcaa
tatatggcgctgatgaacagcggcgtggagtttgctcagaagtatcatctgtcattaggt
atcgcgctgacgccagagcagatggctaacctgacttcagacatcgtctggctggtcagc
cgtgacgtgaccttaccggatggcagtatccaaacggttctggtgccgcaggtgtatgcc
atgattaggccgcaggatattgacggcagcggtgcgcttttggccggtaagcaggtcaat
ttgcaactgaccggtgatttggtcaatcaggggcgcattctggcgggggataagctgaat
gtgctggcgcagaatattcaaaatcagggcggtagcatcagcggcaataatgtgatgttg
ctggcgaataacgatattaataatatcggtgggttgatgcagggctttgacagcctgagg
cttcaggccgggcatgatattaacctcatcaccaccaccacgcagggagaaaaggcgggt
cgcaatggctcttcccatacggctatcaatcaggtggcggcccttgcggttaataacgac
aacggcacattacagctttcggcgggtcacgatattaatctgacggcggcgctgctgagc
aacgccggtcagaacagtgatacgaccatcgaggcgggtcataatctgaatctgaatacc
gtgacggaagagaagcagcgcagttatgtctgggataaggataactatcgtcacgaggga
agttcacaggatgtcgggacccaaattaccggtggtggcaatatcacactggcggcgaaa
aatgacgtcaatgccagagcatctcaggtagagtcaggcggtcaactggcggttgttgcc
ggaaacgatattaatattatggcaggtcagtcatcagcgcatctggacgagcatactaaa
tccagtggcaaaggtggtggtggtatgactaaagtcaccaatgagtcgcacagtaagctg
gattatcagtatgctgaaagcagtcgctttgacggtaacagtgtagtgatgaatgccggt
aataacctgttggttcacggaagtgaagtgattgccaccaatgacctgacgctgaaagcg
ggtaataacctgaccatcaccagtgcacaggagaccagtgatgaacggcggatggagcgt
gaaactaagtccggcctgatgggcagtgggggcattggctttaccgttggtaagatagat
gaaaaatccaccaatactgtccacggtatcagtaatgtagggagtaccattggcagcact
aacggtagtgtcagtctgagcgcaggaaataatctcgcggtcaaaggctcagacgttgtc
gcccagcaagacatcagcctgacgggtaaaaacgtcaccgttgagtcagtggaaaaccag
acccacattcaggacaagtacgaacgtacccagtcgggcgtgaccgttgcgctgtctggt
gcggtgggtggtgcactgaatgcggcggtgaccgaagcgaaacaggcgcaggaaactcac
gacagcaaaatcaaggcgctacaggaaattaaagcggcgctgtcggcggtgcaggccgta
caggccgggatgatggacttgcccaaagacagcgaagggtttgtgggtatcagtatttcg
ggcggtgctcagcgtactgaatccaccaccgacaccaagatacgggcggcgcagggttcg
accatggcggcggggaataatctatcgattaccgccaccggtaacggtgagaaaggggtg
gatggcgatatcacccttaaaggctccgccatcaatgcggggaataatatgctgcttgac
gccaaccgggacgttaacctgctggcggcggcgaacacccagaaaaccgacagtgagaac
aagagctacggcggtaacgccggggtcagttttggtattggcgggggtaaaaacggcctg
cgcttctttgccgatgccaacttttcccaggggaatatgcatgcagacggcctgtactgg
acggagagtcagcttgaggccggtaataacctgaccatcatcagcggtcgggataccaat
ttgattggtgcactggcgaaaggggattccgtcacgatggacgtgggtcgtgacctgacc
gttcgttcattgcaggacaccgacgattacagctacgagcaatactcactgaatattgcc
ggcagctacggcaccggtttcgacggcagtctgggcttcaccatggacaagatggacagc
acgtgggccagcgtgactgaacagagcgggatttacgcgggtcaaggcggttatgacatt
accgtcggtaagcacacccagttagacggggcggtgattgcctcggaagccacgccagaa
ctgaacaatctggacaccggcacgttgggttggagcgatatcaagaaccgagcggattat
gacgtcagccatgtgtcgatgagtatcggctcgggcggtggcgcaccgtttggattcccg
ggcgtaccgggtacacctatcgtggtggcctatggtgacagcgccagtagcacgactcat
gcggcgatagcggacggcacgttgaccattcgtgaccaaaacaatcagcagcaggacatc
agccgtatcagtcacgatacggagaatgccgccaatccgctggataagatttttgatgcc
gatgagcagatgcgtaatctggaagcgataggtctggcggggcagatagtgtcgcaggtg
acgactattgcgaccaatattggggtgaaggcggcgcaggatgaggcgaaggccagcatg
gaggcggcatcgaaagaccccgctattcaggcacaggccagagagaatttagcgaagcag
gatatcgaaaacccaacgcaggagcagttgaataaagctacctacgatgtggtgtaccag
gcggcctatgaagagcaaatgaagacttacggtaccggcagcaatgttggccgagcgata
caggcagccggtgcggcactgacggtagcgatgggcggtggtagtgcagggaatgcggtg
gctgcggcttctgcgccgctcttagctcagggcgtgaaacggttggcggatgacaatttc
ccagtggataaagaacatccggataacgctaatctgtttgccaaagttatcggtcatgcc
atcgtcggtctggcggttgcggaaggttcgggcaatagcggtatggcgggtgcgttagga
gccgccagcggagagctgatagcgaagacgatagcggaagaatattacaaaaccgatccg
gaaaaactgacagaagcccagcgtcaatttattgccaatatgacctcaatcgccaccggc
gtggcggctggtttagtggcggataatacggcagatgcggggatggcggctagtgcggcg
tataattctgctactaacaactaccttagccagtcggaaaagaccgatcttgatttagcg
aagcagaaacttaacgacccggatcctttagtgcgtgaaaaagcacgtcaggattacgac
cagttgatggagaaagatatttccagcgatcaggccgtaatagatgcctgtggtaatggt
caggcgggaagtgcaggttgtgctagtgccagacaggatgcggcagcagcgagggatagc
tatgaaacgggttcgtataactctcaggccaaaaaacagtatgctgacgcttatggtcaa
attgttagcctgttaaatagcacgacggtagatgccgagcataaagagcaagttaccgat
ggtctggctcgttactttatggcggtaacgggcgtagattacgagacagcacggggttat
gccgataccaagcaaggtatggatattcttgttgcgtctttggcgctgaaagataaccta
caagccgcacattcgtatctggcggcagaaggggcagtatcacaggctaatgcagcaaaa
agtgcgtcaaaaacttcttataactggtcttcaggtgagggcgcgtttagtccgaaatca
aacgggaaaattgttgatgttgagtatcccggtggtaagtatgatggtaattcattgcct
tatggtaagactccggtaatagaagaaaaaggtaatgagattgtcactttttaccatggt
gctagtagcgaaaatgcttcactaattaaaacaaacggaattaatctttctgctggtaat
cctcaggccgattttggtagaggtttttatatgactacttcaaaagaagaagcattgatg
tctgcggggagaattttcaagggcgcaggagtatatgatgttgttgaatttaatgtacca
attcaggaaataaaaacgttatctgcgcttgagttcaaatctgcaaatgaaacatggcaa
gactttgtgagatttcataaagaaaatggcccagatgagcttttgcacgctggaaaacct
tatgatttagttactgggccattatttcgacgtgaatctaaagggggggcgataccatgg
gataatcgacttccacaaactagtattcatacagaaaaagctgttgatctttttaatatt
tatatgaataaggacaaatga
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