Limnobaculum parvum: HYN51_15580
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Entry
HYN51_15580 CDS
T05491
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpv03032
]
HYN51_15580
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_15580
Enzymes [BR:
lpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYN51_15580
DNA replication proteins [BR:
lpv03032
]
Prokaryotic type
DNA Topoisomerases
HYN51_15580
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN51_15580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AWH89832
UniProt:
A0A2Y9U1Z2
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Position
1322914..1325565
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AA seq
883 aa
AA seq
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MSDLAREIMPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKMAHDLLADLDKETVDFGPNYDGTEQIPTVLPTRVPNLLVNGSSGIAVGMAT
NIPPHNLVEVINGCLAFIEDENISLEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEIEVDEKSGRETILVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG
MRVVIEVKRDSVAEVVLNNLYSQTQLQVTFGINMVALHQGQPKLLGLKEMLEAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRAASTPSDAKTGLLARPWELGNV
ASMLERAGNDAARPEWLEPEYGIRDGKYYLTEPQAQAILDLRLHRLTGLEHEKLLDEYKE
LLLQIAALLFILESPERLMEVIRDELKAIRDQYNDPRRTEITANTADINIEDLITQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSSRGRLY
WLKVYQLPEASRGARGRPIINILPLEQDERITAILPVREYEAGLNVFMATANGTVKKTQL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEIMLFSAEGKVVRFLEEEKLEDGTIKGV
RPMGRTAAGVRGIKLSDDDRVVSLIVPRGEGEILTVTQNGYGKRTGLSDYPTKSRATQGV
ISIKVSERNGRVVGAVQVDQCDQIMMITDAGTLVRTRVSEVSVVGRNTHGVTLIRTAEDE
NVVGLQRVVEPEEDDEESLCGDENTEEMQDQPSDDVTPESDEE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattatgccggtcaacatcgaagatgagcttaaaaactct
tatcttgattatgcgatgtccgtaattgttggacgcgcattacctgatgttcgagacggc
ctaaagccagtacaccgccgcgtattgttcgctatgaacgtgcttggtaatgactggaac
aaaccatataaaaaatcggcgcgtgtagttggcgacgtaatcggtaaataccacccacat
ggagatagcgcggtctacgataccattgttcgtatggctcagccgttctcattgcgctat
atgctggttgatggtcaggggaactttggttctattgacggcgactcagcggcggcgatg
cgttataccgaaattcgcatgtctaaaatggctcacgacctgttggcggatctggataaa
gagaccgttgactttgggcctaactacgacggaacagaacagatcccaacggtattacca
accagagtccctaacctgttggttaacggttcttcggggattgccgttggtatggcaacc
aacataccacctcacaacttggtggaagtcattaacggttgtctggcctttattgaggat
gaaaatatcagtcttgaagggctgatggagcacatccccggtcctgatttcccgacggca
gccattatcaatggtcgtcgcggtattgaagaagcctacaggacaggccgcggtaaaatt
tatattcgcgcccgtgcagaaattgaagttgatgaaaagagcggtcgtgaaactattctt
gttcacgaaataccttatcaggtgaacaaggctcggttaattgaaaagattgctgagctg
gtaaaagataagaaagttgagggtatcagcgcattacgtgacgagtctgataaagacggt
atgcgtgttgtgattgaagttaagcgcgactcggtagcggaagtggtgctgaataacctg
tattcgcaaactcaacttcaggtcacgtttggtatcaatatggtggcactccatcaggga
cagccaaagctgctgggcctgaaagagatgctggaggcgtttgttcgccatcgccgagaa
gtggttacccgccggactatttttgaactgcgtaaagcgcgtgaacgtgcccatattttg
gaaggtttggctatcgccttggctaacatcgatccgattattgagctgatccgtgcggca
tcaacgccatctgatgcaaaaacagggttattggctcgtccgtgggagttgggtaacgta
gcgtcaatgttagagcgtgccggcaacgatgcggctcgccctgagtggctggagcctgag
tatggtattcgtgacggtaagtattatctgaccgagccgcaagctcaggcgattcttgat
ttacgtttacaccgtctgaccggtcttgagcatgaaaaactgttggacgagtataaagaa
ctgctgctgcaaattgctgcgttgctgtttattcttgaaagcccggaacgcttgatggaa
gttattcgtgacgagcttaaagcgattcgcgatcagtataacgatcctcgtcgtaccgaa
attacggctaatactgctgatatcaatatcgaagatctgattactcaggaagatgtggtt
gtcaccttgtcccatcagggctatgtgaagtatcaaccgctgtctgactatgaggctcaa
cgtcgtggtggtaaaggtaagtcagcagcgcgtattaaagaagaagactttattgaacgt
ctgttggtggctaacacccacgacaccattttgtgcttctccagccgtggtcgcttgtac
tggttgaaagtttatcagttaccagaggctagccgtggtgcccgtggtcgtccgatcatt
aatattctcccgctggagcaggatgaacgtattaccgctattctgccggtacgcgaatat
gaagccggtctgaatgtctttatggctaccgctaacggtaccgtgaagaaaacgcagttg
actgaatttagccgtccacgcagcgccggtattattgccgtcaatctgaacgagggtgat
gagctgattggtgttgatttaacagatggtaccaatgagatcatgctgttctctgctgaa
gggaaggttgttcgcttcttggaagaagagaagctggaagacggtaccattaaaggcgtg
cgtccaatgggccgtaccgctgccggtgtacgtggtatcaaactgagtgatgacgatcgc
gttgtttcattgattgttccacgtggtgagggtgaaattctgaccgtaacgcaaaacggc
tacggtaaacgtaccgggttgtctgattacccaaccaagtctcgtgcgactcagggcgtg
atctccattaaggtgagtgaacgtaacggtcgtgtagtgggcgcggttcaagtcgatcag
tgcgatcagattatgatgattactgatgcgggcactttagtccgtactcgcgtgtcagaa
gtcagcgtagtgggtcgtaatactcacggtgttaccctgattcgtaccgcagaagatgag
aacgttgttgggctgcagcgtgttgttgagccagaagaagatgatgaagaaagcctctgc
ggtgatgaaaataccgaagagatgcaagatcagccatcggacgatgtaaccccggagtct
gatgaagaataa
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