Limnobaculum parvum: HYN51_15640
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Entry
HYN51_15640 CDS
T05491
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
lpv
Limnobaculum parvum
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpv03400
]
HYN51_15640
DNA repair and recombination proteins [BR:
lpv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HYN51_15640
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_16
SLFN-g3_helicase
AAA_22
zf-tcix
AAA_30
DZR
AAA
Zn_Ribbon_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-ProteinID:
AWH89840
UniProt:
A0A2Y9U210
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All DBs
Position
complement(1334042..1335796)
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AA seq
584 aa
AA seq
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MAFTLRPYQQEAVDATLNYFRTHQEPAVIVLPTGAGKSLVIAELARLARGKVLVLAHVKE
LVAQNHAKYCAYGLDADIFSAGLNKKQSSAKVVFGSIQSVARNLDAFSDTFSLLIIDECH
RISDDSDSQYQQIIGHLRQQNPKLCLLGLTATPYRLGQGWIYQYHYHGMIRGDENCLFRD
CIYELPLRYMIKHHFLVPPERLDMPIVQYDFSRLEASSNGLFREVDLNRELKQQQRITPH
IVSQIMEYAETRKGVMIFAATVEHAKEIYGLLPAGQAAFISADTPGDERDRLIDEFKQQK
LHFLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIIGRGLRLSPGKEDCLILDYAGNP
YDLFTPEVGSSRPQSDSQPVQVFCPGCGFANTFWGKCTPSGEIIEHFGRRCQGILEDDEG
HREQCDYRFRFKICPHCGAENDIAARRCHQCQAILVDPDDMLKDALRLKNAKVLRCSGMQ
LQRGQDAQGEWLSITYYDEDGADVTERFRLKTPAQRTAFQQLFIRPHQRAPGVPFLWNDA
SDVIRQQERLRHPDFVIAYLRGEFWRVREKMFDYQGRYRRANEL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacactgcggccataccagcaggaagcggttgatgctaccctgaactatttc
cgcacccatcaagaacctgcggtgatcgttttgcctacgggtgcaggtaaaagcttggtg
atcgctgaactagctcgattggctcgggggaaagtgttggtattagcgcatgtaaaagag
ctggttgcccaaaaccatgccaaatattgcgcttatgggttggatgccgacattttctca
gccggactcaacaaaaaacagagttcagccaaagtggtatttggcagtattcagtccgtt
gccagaaatttagatgcttttagcgatacattctctttattgattatcgatgaatgtcac
cgtattagtgacgacagtgacagtcaatatcagcagattatcgggcacttacgtcagcaa
aaccccaaactttgtctattaggattaaccgccacgccttatcgattaggccaagggtgg
atttatcaatatcactatcacggtatgattcgcggtgatgaaaactgcctgttccgcgac
tgcatctatgagttaccgctacgctacatgatcaagcatcactttcttgttccgccagaa
agactggatatgcccatcgttcaatacgacttcagccgtttagaagccagtagcaatggt
ctgttccgtgaggtagacctcaatcgggagctaaaacagcagcagcgaatcacaccacac
atcgtcagccagattatggagtacgccgaaacccgtaaaggcgtgatgatttttgccgct
accgttgaacatgccaaagaaatatatggcttgcttcctgctggtcaagctgcatttatc
agtgcagatacaccgggagatgaacgtgaccgtctgatagatgaattcaaacaacaaaag
ctacactttttggtcaatgttgcggtattaactaccggctttgacgcaccgcacgtggat
ctcattgctattctccgcccgacggagtcaatcagcctgtatcaacaaattattggccgt
gggctgcgcctctccccgggaaaagaggattgcctgattctagactatgccggtaacccc
tatgacctatttacaccagaggtgggcagcagtcggccacaaagtgatagtcagccagtg
caggtattttgccctggctgtggcttcgccaatacattctggggaaaatgcacgccatca
ggagaaattatcgaacattttggtcgccgctgtcagggtattctggaagatgatgaaggc
catcgggagcagtgtgactatcgattccgctttaaaatctgccctcactgcggtgcagaa
aacgatatcgctgcaaggcgctgtcaccaatgtcaggcaatactggtggatccggacgat
atgttgaaagatgccctgcgtctgaagaacgccaaagtactacgctgtagtggaatgcaa
cttcagcgagggcaggatgctcaaggcgaatggctcagcatcacctattacgatgaagat
ggtgctgatgtaactgaacgctttcggttgaaaacgccagcccaacgtaccgcatttcaa
caactttttattcgccctcatcagcgagcgccgggagtgccttttctctggaatgacgcc
agcgatgtgattcgtcagcaggaacggctgcgccatcctgattttgttatcgcttactta
cgaggtgagttttggcgagtacgtgaaaagatgtttgactatcagggccgctatcgtcgg
gccaatgaactgtaa
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