Lactobacillus paragasseri: LpgJCM5343_00060
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Entry
LpgJCM5343_00060 CDS
T05840
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpw03032
]
LpgJCM5343_00060 (gyrA)
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_00060 (gyrA)
Enzymes [BR:
lpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LpgJCM5343_00060 (gyrA)
DNA replication proteins [BR:
lpw03032
]
Prokaryotic type
DNA Topoisomerases
LpgJCM5343_00060 (gyrA)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LpgJCM5343_00060 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LRS4
Motif
Other DBs
NCBI-ProteinID:
BBD47653
LinkDB
All DBs
Position
6314..8803
Genome browser
AA seq
829 aa
AA seq
DB search
MANENQPQDHRIRNVDLTHTMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMHELG
VTPDKQYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEAKMSKIAVEMLRDINKETIDWQRNYDDTENEPVVLPARIPNLLVNGASGIAV
GMTTNIPPHNLAEVISGIHMLMDNPDVTTKDLMKVIPGPDFPTGGIVMGRGGIYRAYETG
KGNIVVRAKTNIETEKSGRERIVVSELPYLVNKAELVKKIADLAREKTIDGITGVRDESD
QTGMRITIDIRRDASASVVLNNLFKETQLQANFGMNMVAIVNGAPHFLTLKQMLEYYLHH
QEDVITRRTKFELKKAEARAHILAGLRIALDHIDEIIRIIRGSQNSDIAKAQLIQNFGLD
DRQSQAILDMRLVRLTGLERDKIEAEYQDLQAKIADYKDILAKPERIDEIIYNELLDIQK
RFGDDRRTKIAEGEAVSIEDEDLIEQKDVLLTLTHNGYIKRMPADEFKVQNRGGRGIKGM
GVQDDDFINHLIFSSTHDFLLFFTNLGKVYSKKAYEIPEFGRNAKGLPIVNLLELDKGEK
IQAVINVPEGADDNYLFFVTKMGTVKRTKVSEFQNIRRSGLIALTLRDGDELNNVLTTDG
KQNILIGTHLGYAVTFNENDVRSMGRTAAGVRGINLRDNDYVVGSDILEPNSEVLVISEK
GYGKRTAASEYPVKGRGGKGIKTANITEKNGPLAGVTVVNGDEDIMLITSAGVMIRFDVD
DVSQTGRATLGVRLIKVDDGAQVASITAVPKANDEDEKSTDEEEPVEEN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaatcaacctcaagatcacagaatacgtaatgttgatttgacccatacg
atgcgtagctctttcttagattatgctatgtcagttattgtggcacgtgccttacctgac
gttcgggatggtctaaagcctgtacaacgtcgtattctttacggaatgcatgaattaggg
gttacaccagacaaacagtacaaaaagagtgccagaattgttggagaagttatgggtaag
tttcacccacatggtgactcctcaatttatttagctatggctcacatggctcaagacttt
tcatatcgttatatgctagttgatggacacggaaacttcggttctgtcgatggggatgaa
ccagccgcaatgcgttataccgaggcaaaaatgagtaaaattgcggttgaaatgcttcgt
gatatcaataaagaaacgattgactggcaacgtaactatgatgatacggaaaatgaaccg
gtagttttacctgccagaattcctaatttacttgtaaacggtgctagtggtattgcagtt
ggtatgacaactaatattccgccacataatttggcggaagtaattagtgggattcatatg
ttgatggataatcctgatgttactaccaaagacttgatgaaggttattcctggtcctgat
tttccaactggtggtattgtaatgggccgtggcggtatctaccgcgcttatgaaacaggt
aagggtaatatcgtcgttcgtgctaagaccaatattgaaacagagaagagtggccgtgaa
cgaatcgtagttagtgaattaccatacttagtaaataaggctgaactagttaagaaaatt
gcagatttagctcgtgaaaaaacaattgatggtattaccggagttcgtgatgaatcagac
cagactggtatgagaattacgattgatattcgccgagatgcaagtgcgagtgtggttttg
aataacttatttaaagaaacccaattgcaggcaaacttcggaatgaatatggttgcaatt
gtaaacggcgctccacacttcttaactttgaagcaaatgcttgaatactatcttcaccat
caagaagatgttattactcgcagaactaagtttgaattaaagaaggctgaagctagagca
catattttagctggattgagaattgcactagatcacattgatgaaatcattaggattatt
cgtggctcccaaaacagcgatattgctaaggcacagttgattcaaaactttggattagat
gatcgtcaatctcaagctattttagatatgcgtctggttcgtttaacaggtttagagcga
gacaagattgaagctgaatatcaagatttacaagcaaaaattgcagattacaaagatatt
cttgctaagccagaacgaatcgatgaaattatctacaatgagttgcttgatattcaaaag
cgttttggtgatgatagacggactaagattgcagaaggcgaagcagtttcaattgaagat
gaagatttaattgaacaaaaagatgtacttttaacccttacccataatggctacattaag
cggatgccagctgatgaattcaaggtacaaaaccgtggtggacgcggaataaagggaatg
ggagttcaagatgatgactttatcaatcacttgattttctcaagtacccatgactttttg
ctattctttactaacttaggtaaggtttactcaaagaaagcttatgaaattccagaattt
ggtaggaacgccaaaggactgccaattgttaacttgctagaacttgataagggtgaaaag
attcaagcggttattaacgttcctgaaggtgcagatgataactacctcttctttgttact
aagatgggaacagtcaagagaacaaaagttagtgaatttcaaaatatccgtcgtagtggc
ttgattgccttaacccttcgcgatggggatgaactgaataatgttttaactactgacggt
aaacaaaatatccttattggaacccatttaggctatgcagttacctttaatgaaaatgat
gttcgttcaatgggaagaaccgcagcaggtgtacgcggaattaatctaagagacaacgat
tatgtagttggatctgatattttagaacctaattcagaagtgttagtaatttctgaaaaa
ggttacggaaaacggactgcagcttctgaatatccagttaaaggacgtggtggtaaagga
attaagactgctaacattactgaaaagaatggtcctttagcaggtgtaacagtagttaat
ggtgatgaagatatcatgttaattactagtgctggcgttatgattcgtttcgacgttgat
gatgtttctcaaactggtcgagctactttaggtgtacgtttaatcaaggttgatgatggt
gctcaagttgcaagtattactgcagtaccaaaggctaatgatgaagacgaaaaatcaact
gatgaagaagagccagtagaagaaaattaa
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