Lactobacillus paragasseri: LpgJCM5343_00860
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Entry
LpgJCM5343_00860 CDS
T05840
Symbol
mpg
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LpgJCM5343_00860 (mpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_00860 (mpg)
Enzymes [BR:
lpw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LpgJCM5343_00860 (mpg)
DNA repair and recombination proteins [BR:
lpw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LpgJCM5343_00860 (mpg)
Prokaryotic type
LpgJCM5343_00860 (mpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
BBD47733
LinkDB
All DBs
Position
complement(103882..104508)
Genome browser
AA seq
208 aa
AA seq
DB search
MNYEDFFTNRSTSEISKDLLGRTLSFNNGNEILSGTIVEAEAYVGVKDRAAHSYGGRRSQ
ANEGLYRPGGSLYIYSQRQYFFFDVACQAAGEPQGVLIRAIDPLTGIDTMIKNRNGKTGP
LLTNGPGKMMQALGITSRKWDLARLEDSPFDIDINHKRKIEEITALPRVGINQSDPKWAK
KKLRFIVAGNPYVSDIKKKDVKKNHGFI
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaactatgaagatttttttactaatcggtctactagtgaaattagcaaagatctgttg
ggtagaactctatctttcaataatggaaacgaaattttatcaggcacaatagttgaagca
gaagcctatgttggtgtaaaagatcgtgctgctcattcttatggtggtagacgcagtcaa
gcaaatgaaggcttatatcgtcctggtggcagtttatatatctattctcagcggcaatat
tttttctttgatgttgcctgccaagcagcaggcgaaccacaaggagttttaattagggcc
attgacccactaactggaattgataccatgattaaaaaccgtaatggcaaaactggtccg
cttttaactaatggtcctggaaagatgatgcaggctttaggaattactagtagaaaatgg
gatttagctcggttagaagattctcccttcgatattgacattaatcataaacgtaaaatt
gaagaaattactgctcttccaagagtcgggatcaatcagtcagatcctaaatgggccaag
aaaaaactaagatttatagttgctggtaatccctatgtttcagatattaagaaaaaagat
gttaaaaaaaatcacggatttatttga
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