Lactobacillus paragasseri: LpgJCM5343_01390
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Entry
LpgJCM5343_01390 CDS
T05840
Symbol
nrdD
Name
(GenBank) ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw00230
Purine metabolism
lpw00240
Pyrimidine metabolism
lpw01100
Metabolic pathways
lpw01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LpgJCM5343_01390 (nrdD)
00240 Pyrimidine metabolism
LpgJCM5343_01390 (nrdD)
Enzymes [BR:
lpw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
LpgJCM5343_01390 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
BBD47786
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All DBs
Position
154356..156566
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AA seq
736 aa
AA seq
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MLQQDAQIKSITQMTLPETAIKRDGSIYPFALYKIEMVLDNLHLTEHEADILPSILKKLN
GVKQTSTKDIADAFVQTLTELGFDDEANAYVDYRREDEANFEKQTETTNRLDRLVHHDPT
IVNENANKDSRVFSTQRDLTAGVVGKTIGLTMMPEHIAKAHLRGDIHWHDLDYTPLSPLT
NCCLIDFKEMLSHGFTIGNANIESPHSIETATAQMSQIIANVASSQYGGCSADRVDEVLA
PYAEKNYHKNINEAREFFDDEEKIKAFAIKRTKKDIYDAMQALEYEINTLFSSQGQTPFT
TLGFGLGTSWIEREIQKAILKIRIEGLGKDKRTAIFPKLVFTLKKGLNLHPGDPNYDIKE
LALECSTKRMYPDIVSYDMIKKITGSFKAPMGCRSFLQGWKDPETGKEVNSGRMNLGVVT
LNLPRIAMESKGDKDLFWQIFREKVQTAHEALQIKAKRCTEAVPDNAPILYEYGAFGKRL
NAEDNVNDLFKNGRCTVSLGYIGLYEVGTVFYGPNWEHNEEAHQFTINIVKELHDYCAKW
EKEDPNHYHYSVYSTPSESLTDRFCRLDTKKFGKVKDITDKEYYTNSFHYDVRKHPTPFE
KLAFEAPYPFYAAGGFIHYCEYPNLKQNPKALEAVWDWAYDKVGYLGTNTPIDQCYKCGF
KGEFKATAKGFECPQCGNHDPETCDCVKRTCGYLGNPLKRPMVHGRHEEIVHRVKHLNLG
MEEKMAKDEVRKNDEY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaagatgctcaaattaaatcaattactcaaatgacccttccagaaacagcc
attaaaagagatggtagcatctatccttttgctctttacaaaattgaaatggtcttagac
aacttgcatcttacagaacatgaagcagatattttaccttctattttgaaaaaattaaat
ggtgtaaaacaaacttctacgaaagatattgcagatgcctttgtccaaactttaacagaa
ctaggatttgatgatgaggccaatgcttacgtagactaccgcagggaagacgaagctaat
tttgaaaagcaaacggaaactaccaaccgtctggatcgtttagtccaccatgatccaacg
attgttaatgaaaacgccaataaagactcacgtgttttttcaactcagcgtgatttaact
gctggtgttgttggtaagacgattggattgacaatgatgcctgaacatattgctaaggcg
cacctacgtggcgatattcactggcatgatttagactatactccacttagcccgttaact
aattgctgtttgattgattttaaagaaatgcttagtcatggctttacgattggaaatgcc
aatattgagtctcctcattcaattgaaactgctacggcgcaaatgtcgcaaattattgct
aatgtagcttccagtcaatatggtggctgctcagctgatagagttgatgaagttttagct
ccttatgctgaaaagaattaccataagaatattaatgaagcgcgcgaattttttgatgat
gaagaaaaaatcaaggcttttgcaatcaagagaactaagaaagacatctacgatgctatg
caagctcttgaatacgaaattaataccttattttcaagtcagggacaaactccatttact
actttaggatttggtttaggaacttcatggattgagcgcgaaattcaaaaggctatcttg
aagattagaattgaaggtttaggtaaagataaaagaactgctatctttcctaaattagtt
tttaccttaaagaaggggcttaacttacatcctggcgatccaaactacgatattaaggaa
ttagccttagaatgttcaactaagcggatgtacccagatattgttagctatgacatgatt
aagaaaatcacaggttcatttaaggctccaatgggttgtcgttcatttttacagggctgg
aaagatccagaaactggtaaggaagtaaattctggtcgaatgaacttaggtgttgttact
ttgaatttacctagaattgcaatggaatcaaaaggtgacaaagatttattctggcaaatc
tttagagaaaaagttcaaacagcacatgaagctttacaaattaaggctaagcgttgtact
gaagccgttcctgataatgccccaattctttacgaatatggtgcttttggaaagcgtctg
aatgcagaagataatgtaaatgacttgtttaaaaatggtcgttgtactgtttctttaggc
tatatcggcttatatgaagtcggtaccgttttttacgggccaaactgggaacacaatgaa
gaagcccatcaatttacaattaatattgttaaagagcttcatgactactgcgctaagtgg
gaaaaagaagatccaaatcactaccattacagtgtttactcaactccaagtgaaagttta
actgatagattttgccgtttagatactaagaaattcggtaaagtgaaagatattactgac
aaggagtactacactaattctttccactatgatgttagaaaacacccaactccatttgaa
aaattagcctttgaagcaccatatccattttatgcggctggtggctttattcactattgt
gagtacccaaaccttaaacaaaatcctaaggctttagaagctgtttgggattgggcttat
gacaaggtaggatacttaggaactaacactccaattgatcaatgctataagtgtggtttt
aagggtgaatttaaggcaactgctaaaggatttgaatgtcctcaatgcggcaaccacgac
ccagaaacttgtgattgtgtaaaacgtacttgtggctatcttggtaatcctttgaagcgt
ccgatggttcatggtcgtcacgaagaaattgttcaccgtgtaaagcacttgaacttagga
atggaagaaaaaatggctaaggatgaagttagaaagaatgacgaatattaa
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