Lactobacillus paragasseri: LpgJCM5343_02770
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Entry
LpgJCM5343_02770 CDS
T05840
Symbol
lysU
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LpgJCM5343_02770 (lysU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpw01007
]
LpgJCM5343_02770 (lysU)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpw03016
]
LpgJCM5343_02770 (lysU)
Enzymes [BR:
lpw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LpgJCM5343_02770 (lysU)
Amino acid related enzymes [BR:
lpw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LpgJCM5343_02770 (lysU)
Transfer RNA biogenesis [BR:
lpw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LpgJCM5343_02770 (lysU)
Prokaryotic type
Other AARSs
LpgJCM5343_02770 (lysU)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBD47924
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Position
319787..321328
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AA seq
513 aa
AA seq
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MAKNEMNDQLIVRREKMDEMRENGIEPFGVRKFDRQDLARTLNEKYSKEDKDELNADMPM
TKIAGRMLAKRGKGKVGFADLYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEV
MKTDTGELTIRATHVTFLAKALRPLPNKWDGLKDVEQIYRQRYLDLITNHESYMRFVHRT
QIIQAIRNYLNNQDFLEVETPVLHNIPGGAEARPFITHHNALDIDLYMRIALELPLKRLI
VGGMERVYEIGRVFRNEGVDTRHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPD
GKINYQGTDIDLGKPFRRVHMVDLIKEKTGVDFWKEMTDEEAKKIAEEHGIHTEPFWKVG
HVINAFFDEFCEKTIVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIFILGMEYGNAFSE
LNDPVDQRHRFEEQMEEREAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTDA
PAIRDVLLFPTMRPEKVEDVDAEVQEDLKKKNK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagaatgaaatgaacgaccaactaattgttcgtcgtgaaaaaatggacgaaatg
cgtgaaaatggcattgaaccttttggtgtaagaaagtttgatcgtcaagacttagctcgt
actttgaatgaaaagtatagtaaagaagataaagatgaattaaatgccgatatgcctatg
accaaaattgcaggtcgtatgcttgccaagcgtggtaagggtaaagtaggttttgctgat
ctttatgaccgtactggtaagattcaaatttatgtacgtaaagatattgttggcgaagac
aactacaagatttttaagaaatcagatattggtgacttcttaggcattgatggggaagta
atgaaaactgatactggtgagttaactattcgtgctactcacgttactttcttagctaaa
gctcttcgcccattacctaataaatgggacggtttgaaagatgttgaacaaatttatcgt
caacgttatcttgatttgattactaatcacgaaagttacatgcgttttgttcatcgtact
caaattattcaagctattcgtaactacttaaataaccaagactttttagaagttgaaact
ccagttcttcacaatattccaggtggtgctgaagcacgtccatttattactcaccacaac
gctttagacattgatctttacatgagaattgcgttggaacttccactgaagcgtttgatt
gttggaggtatggaaagagtttatgaaattggccgagtatttagaaacgaaggtgttgat
actcgccataatcctgaatttactgagcttgaaacttatgctgcttactgggatttccac
gatgtcatggatgaagcggaaggaattatcagagcagctgctaaagtagtttctccagat
ggtaagattaactaccaaggtactgatattgacttaggtaagccattccgacgcgttcat
atggttgacttaattaaggaaaagactggtgttgacttctggaaagaaatgactgacgaa
gaagctaagaagatcgccgaagaacatggaattcatactgaaccattctggaaagtcggt
catgtaattaatgctttctttgatgaattttgtgaaaagactattgttgatccaaccttt
gtttatgggcacccggtagaaatttcaccacttgctaaaaagaatgcagatgatccaaga
tttactgatcgttttgaaatctttattttgggaatggaatacggaaatgccttctcagaa
ctaaatgatccagttgatcaacgtcaccgttttgaagaacaaatggaagaacgcgaagct
ggtaatgatgaagctgatatgattgatgaagattatatccgtgcaatggaatttggtatg
cctcctacaggtggtctaggtattggtattgaccgtttggtaatgcttttaactgatgct
ccagctatccgtgatgtattgctcttcccaacaatgcgtcctgaaaaggttgaagacgtt
gatgccgaagtgcaagaagacttgaagaaaaagaataaataa
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