Lactobacillus paragasseri: LpgJCM5343_03320
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Entry
LpgJCM5343_03320 CDS
T05840
Symbol
sms
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_03320 (sms)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LpgJCM5343_03320 (sms)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA
GvpD_P-loop
AAA_24
AAA_16
ABC_tran
AAA_14
AAA_22
DUF7129
RUBY_RBDX
AAA_5
nSTAND3
SLFN-g3_helicase
divDNAB
NACHT
AAA_19
NTPase_1
DUF7125
MMR_HSR1
HypA
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BBD47979
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Position
363042..364421
Genome browser
AA seq
459 aa
AA seq
DB search
MAKVKTRYKCRNCGYISASYLGRCPNCGAWNQFEEETQEVKKVSTKATASRLMTKIGNND
PVKLNEVKAEKEKRIVTPFEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQITGALAKE
HSVLYVSGEESASQIKMRADRLGVSNSGILLYPETNMQNIREQIDEIKPDFLVIDSIQTM
NEPSLDSMVGSASQVREVTSELMKIAKNDQITTFVIGHVTKEGAIAGPKIMEHMVDTVLY
FEGDGHHSYRILRSVKNRFGAANEIGMFEMKNEGLTEVNNPSAIFLDERLPNSTGSAVVV
SLEGTRPLLADIQALVTPTAFGYAKRTTSGLDFNRVALLLAVLEKRGNLMLQNQDAFLTA
TGGIKLNEPAIDLAICMAVASSYKNKEISSTDCFVGEVGLTGEIRRVNQIEARVKEAAKV
GFKRIFIPKHNLTTELKNNSEIEVIGVASLPQALKLVFN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttaaaacacgttataagtgccgcaattgtggttatatttcagcttcttat
ttaggtagatgccctaattgcggtgcctggaatcaatttgaagaagagacgcaagaagta
aaaaaagtatcaactaaggcaactgctagtcgcttaatgactaaaattggaaataatgat
ccagtaaaattaaatgaagtaaaagctgaaaaagaaaaaagaattgtaactccttttgaa
gaactaaatcgagttctaggaggcggaatagttccgggttctttagttttaattggtgga
gatcctggaattggtaagtcaactttgatgcttcaaattaccggtgctttagctaaagag
catagtgttttatatgtttcaggagaagagtcggctagtcagataaagatgcgagctgat
cgtttaggtgtaagcaacagcggaattttgctttatcctgaaaccaatatgcagaatatt
cgcgaacagattgatgaaattaagccggattttttggtaatcgactctatccaaacaatg
aatgagccatctcttgattcgatggttggatcagcttctcaagttcgagaagttacgagt
gagttaatgaagattgccaagaatgatcagattactacttttgttattggacatgtgact
aaagaaggtgcaattgctggccctaagattatggaacatatggttgatactgtactttac
tttgaaggggatggccaccattcatatcgaattttaaggtctgtcaaaaatcgttttggt
gcagctaatgagattggtatgtttgaaatgaaaaatgaaggactaacagaagtaaataat
ccttcagcgattttcttagacgaacgtttaccaaattctacaggttcagcagttgtcgtt
tcgcttgaaggaacaaggccacttctagccgatattcaagctttggtaactccaactgcc
tttggctatgctaaaagaactacttcggggttagatttcaatcgtgtagccttattatta
gcggttttagaaaaacgtggtaacttaatgttacaaaatcaagatgcatttttaacggca
acaggtggaattaaattaaatgagccagcgattgacttggcaatttgtatggctgtagct
tctagttataaaaataaagaaatttcttctactgattgttttgtaggcgaagttggctta
accggtgaaattagaagagttaatcaaattgaagctagagttaaagaagctgctaaagta
ggctttaagcgaatttttattccaaaacataatttaactactgagcttaagaataattct
gagattgaagtaattggtgtagcaagtttgccgcaagctttaaaactggtttttaattag
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