Lactobacillus paragasseri: LpgJCM5343_04090
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Entry
LpgJCM5343_04090 CDS
T05840
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LpgJCM5343_04090 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_04090 (mutS)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LpgJCM5343_04090 (mutS)
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_14
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BBD48056
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Position
435447..438020
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AA seq
857 aa
AA seq
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MAKKDTTPMMKQYYEIKEQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKN
PIPMAGVPHLAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLITPGTMMQERP
DQAKDSNYLTSVISTNSGFGLAYSDLSTGETFSTHLTNFEGVANELLSLQTREVVYNGHL
TEANKDFLKKANITISEPVKVESEHAEISYVAQNLTDDAEIKATKQLVAYLLSTQKRSLA
HLQVAQSYEPTQYLQMSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIE
RPLLSVTEINRRQEMVQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGSVNAREMLQLA
HSLGAIPDILNSLLETNNPHLQNFAKQIDPLKGIHDLIVNTIVDNPPLLTTEGGLIREGV
SDQLDRYRDAMNNGKKWLSEMESHEREVTGINNLKVGYNKVFGYYIEVTNSNKDKVPTDR
YTRKQTLTNAERYITPELKEHESLILEAEAKSTGLEYDLFVKLREDVKKYIPALQKLAKQ
VASLDVLTDFATVSEQNNYVRPDYTVDKQEINVVNGRHPVVEQVMTAGSYIPNDVKMDQD
TDIFLITGPNMSGKSTYMRQMALIAIMAQIGCFVPADSATLPIFDQIFTRIGAADDLISG
QSTFMVEMSEANDALQHATKRSLILFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFA
THYHELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRKVL
REATTMLKRLERQGAGELQPASEQLDLFTAEEASEPAISDDEKDVLDDIQNVYLADKTPL
QVMELVSQWQQELKDKD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaagatacgacaccaatgatgaagcaatactacgagattaaggaacaatat
cccgatgcgtttttgttttatcgtgtgggcgatttctacgaattatttgaagatgatgca
gttaagggtgcacaaattctagaattaacgttaactcatcgttcaaataaaactaaaaat
ccgattccaatggcaggagttcctcacctagctgtggatacttacgtcaatactttggtg
gaaaaaggatataaggttgcactttgtgaacaacttgaagatcccaagaaagctaaagga
atggtcaaacgcgggattattcaattaattacgccaggaaccatgatgcaggagcgtcct
gaccaagcaaaagatagtaactacttaacttcagttatttcaacaaattctggctttggc
ctagcttacagtgacttatccactggggaaactttttccacacacttaactaattttgaa
ggtgtcgcaaatgaattattatcccttcaaacaagagaagttgtgtataacgggcattta
acagaagcaaacaaagactttttgaagaaagctaatattactatttctgaaccagttaaa
gtagaaagtgaacatgcagaaatttcttatgtagcccaaaacttaactgacgatgcggaa
attaaggccactaagcaactagtagcttacttactgtcaacgcaaaagcgtagtttagcc
cacttacaagttgctcaaagctatgagccgacgcaatatttgcagatgtctcatactgtg
caaacaaacttagaattaatcaagtcagctaagacttctaagaagatgggctctttattc
tggctcttagataagacaagtacggcaatgggcggtagattgttaaaatcatggattgag
cgtccgcttttatcagttactgaaattaaccgacgtcaagaaatggttcaagcacttctt
gatgattacttcacccgtgaaaaagttattgacagtttaaagggtgtgtatgacctagaa
agactgactggtcgaattgcttttggctcagtcaatgcacgtgaaatgctacaattagcg
cattctttaggtgcaattcctgatattttgaattccttgcttgaaacgaataatccacat
ctgcaaaactttgctaagcaaattgatcctttaaagggaatccatgatttgattgttaat
actattgtggataatcccccacttttaacgacagagggtggtttgattagagaaggagtt
tcagaccaattagaccgctaccgggacgcgatgaataatggtaaaaaatggctatctgaa
atggaaagccacgaacgtgaagtgactggaattaacaacttaaaggttggctataacaag
gtctttggttactatattgaagttacgaattcaaataaagataaggtgcccactgatcgc
tacactagaaagcaaacattaactaatgcagagcgttatatcacgcctgaactaaaggaa
catgaatcattaattctagaagcagaagctaagtcaactggcttagagtatgacttgttt
gtaaagctaagagaagatgttaaaaagtatattccagctttacaaaaattagctaaacaa
gttgcaagtttagatgttttgacagattttgcgacagttagtgaacaaaataattatgtt
cgcccagactatacagttgataagcaagaaattaacgtagttaatggtcgccacccagtt
gttgaacaagttatgactgctggtagttatattccaaatgacgtgaagatggatcaagat
actgatattttcttaattactggaccaaatatgtctggtaagtctacttatatgcgtcaa
atggccttgattgcaatcatggcgcagattggttgttttgttccagcagatagcgcaact
ctaccaatttttgatcaaatctttactcgaatcggagcagcagatgatttgatttctggt
cagagtacttttatggtagaaatgagcgaagctaatgatgctttgcaacatgcgacaaaa
cgttctttaattttatttgatgaaattggacgaggcactgctacttatgatgggatggct
ttggccggagcaattgtgaagtatcttcatgataaggtcggagcaaagacgctctttgcg
actcactaccacgaattaactgatttagaccaaacactaaaacatttaaagaacattcat
gttggtgcgaccgaagaaaatggcaagttgattttcttacataaaattttgccaggacca
gctgatcaatcttatggtattcatgttgctcaattggcaggcttaccacgtaaagtttta
agagaagcaactacgatgctgaagagattagagcggcagggagcaggagagttacagccg
gctagtgagcaacttgatctctttaccgctgaagaagcaagtgaaccggcaatttcagat
gatgaaaaagatgtcttggatgatattcaaaatgtgtatcttgctgacaaaactcctttg
caagtcatggaacttgtatctcagtggcagcaagagttgaaagataaggactaa
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