Lactobacillus paragasseri: LpgJCM5343_05160
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Entry
LpgJCM5343_05160 CDS
T05840
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LpgJCM5343_05160 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpw02000
]
LpgJCM5343_05160 (potD)
Transporters [BR:
lpw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LpgJCM5343_05160 (potD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BBD48163
LinkDB
All DBs
Position
complement(558876..559892)
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AA seq
338 aa
AA seq
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MKFKKFYLWSLILITAGVAISTSACSSKSSEKLVVSTFGLSTKQMRSDVLNPFSKKYNVK
VSTQFGDSSTRLTQIEHNPNSNVDVIELAQNNAVTGAKKKLFKKLDFSKIKNFKYLSKDQ
QQLAKKTNTVPYTVNSVGIIYNPKKVNIKDWNDLWSDKLKQKISVPDMTTTFGPAMLYIA
GDHAGTQVTKDDGTAAFKAMKELKPNIVKTYTQSSDLSNMFKTGEISAAVVGDYAVGMLQ
ATNPDLKYFVPASGTYANYDNVSILKNSKNTNAAYQYINYRLSESVQKKVANTKSLNNAP
VNQQVNLSKKEAANKTYGDVAKRAKTIDFFYVNSHISK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaaaagttttacctttggtcccttatcttaattactgctggtgttgccatt
agtacctctgcttgttcatcaaaatcaagcgaaaaattggtagtttcaacctttggctta
tctactaagcaaatgcgctcagatgttttaaatcccttctcaaaaaaatataacgtcaaa
gtctcaactcaatttggagacagttcaactcgactaactcaaatagaacataatcccaac
tctaatgtcgatgttattgaactcgctcaaaataatgctgttacaggagcaaaaaagaaa
ttatttaaaaaactagacttttcaaaaatcaaaaatttcaagtatctatctaaagatcaa
cagcaattagctaagaaaaccaatactgttccctatacagtaaatagtgtaggaattatt
tataatcctaaaaaagtaaacattaaagattggaacgatctttggtctgataagctcaag
caaaaaatatccgttccagatatgactactacatttggccctgctatgctatatattgcc
ggtgatcatgctggtacccaagttactaaagatgatggtactgccgcatttaaagcaatg
aaggaattaaaacctaacatcgtaaaaacttatactcaaagttctgatttaagtaatatg
tttaagactggagaaattagtgctgcagttgtaggtgactatgctgtcggaatgcttcaa
gcaactaatcctgatttaaaatatttcgtaccagcttctggcacttatgctaactatgat
aatgtttctattttgaaaaatagtaaaaatacgaatgcagcttatcaatatattaattac
cgtttaagcgaatcagtgcaaaagaaagttgctaatactaaatcacttaataacgctcct
gttaatcaacaagttaatttaagcaaaaaagaggcagctaataaaacttacggtgatgta
gctaaacgtgctaaaaccattgatttcttctatgttaacagccatatttccaaatga
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