Lactobacillus paragasseri: LpgJCM5343_07060
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Entry
LpgJCM5343_07060 CDS
T05840
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LpgJCM5343_07060 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_07060 (xseB)
Enzymes [BR:
lpw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LpgJCM5343_07060 (xseB)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LpgJCM5343_07060 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KIF21A_4th
PUMA_CC
KxDL
Retrotran_gag_2
Syntaxin_2
WIT1_2_N
DUF7018
Sec10_N
DUF2570
Motif
Other DBs
NCBI-ProteinID:
BBD48353
LinkDB
All DBs
Position
725140..725385
Genome browser
AA seq
81 aa
AA seq
DB search
MATKKNNFEEQLNELQEIVNKLESGNVPLEDALNEFQAGVKLSRELEKKLNDAEQTVAKL
VDKDGNEKTLDPQNASAPEEE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaagaaaaataattttgaagaacaattaaatgaattacaagaaattgtcaat
aagcttgaaagtggcaacgttcctcttgaagacgctttaaatgaatttcaagctggagtt
aagttgagtcgtgaactggaaaagaaacttaatgatgccgagcaaacagttgctaagtta
gttgataaagatggaaacgagaagacgctcgatccccaaaatgcgtcagctcctgaggaa
gaataa
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