Lactobacillus paragasseri: LpgJCM5343_07270
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Entry
LpgJCM5343_07270 CDS
T05840
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LpgJCM5343_07270 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpw02000
]
LpgJCM5343_07270 (oppD)
Transporters [BR:
lpw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LpgJCM5343_07270 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
nSTAND3
NPHP3_N
RsgA_GTPase
NB-ARC
AAA
AAA_15
Sigma54_activat
AAA_29
AAA_17
nSTAND1
DUF5906
PRK
NTPase_1
G-alpha
ATPase_2
MobB
DUF87
AAA_16
NACHT
RNA_helicase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BBD48374
LinkDB
All DBs
Position
745779..746789
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AA seq
336 aa
AA seq
DB search
MEKQSDLLLDIEHLHTAYRLHGKFYDAADDINLTLKRNEILAVVGESGCGKSTIASSIIG
LYDHKNTRVTGDILYNELNLVNLNESLFNKIRGNNIGMIFQDPLASLNPLMKVGDQVAET
LYYHTDMDEKARHARVIELFNQVGMPRPEEMYEMYPHELSGGLRQRVVIAIAIACKPEII
IADEPTTALDVTIQAQILDLLKEIQKESHSGIILITHDLGVVAETADQVAVMYAGQIVEK
ADVKTIFENPLHPYTRSLLHSMPQTDDESQDLHVIHGTVPSLVNMPRTGDRFAARIPWIP
ASAHEENPKIHEVEPGHFVRCTCWQSFHFQDEEKKG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagcaaagtgatcttttattagatatcgaacacttgcataccgcatatcgtttg
cacggtaagttttatgatgccgctgatgacattaacttgaccttgaaacgaaatgaaatt
ttggcagttgttggtgaatctggttgtggtaaaagtacaattgcttcaagcattattggt
ttgtacgaccacaaaaatacgagagtaaccggagatatcttgtacaatgaattaaactta
gttaacttaaatgaatcattgtttaacaaaattcgtggaaacaatattggaatgattttc
caggatccattggcatctcttaatccattaatgaaggttggagatcaagttgctgagaca
ctttactaccatactgatatggacgagaaagctcgtcatgcacgtgtaattgagctcttt
aaccaagttggtatgccacgtcctgaagaaatgtatgagatgtacccacatgaattatct
ggtggattgcgtcaacgtgtcgtaattgcgatcgcaattgcatgtaaaccagaaatcatt
attgctgatgaaccgactacagcattggatgttactattcaggcacaaattttggattta
cttaaggaaattcaaaaagaatcacattcaggaattattttgattactcacgacttaggt
gttgttgctgaaaccgctgatcaagtggcagttatgtatgctggacaaattgttgaaaaa
gctgatgttaaaacaatttttgagaatccacttcatccatatacacgttcacttcttcat
tcaatgccgcaaacggatgatgaaagccaagatcttcacgtgattcatggaacagttcct
tcgctagttaatatgcctagaactggtgacagatttgctgcaagaattccttggattcca
gctagtgctcatgaagagaaccctaagattcatgaagtggaaccagggcattttgtaaga
tgtacttgctggcaaagcttccatttccaagatgaagaaaagaaaggatag
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