Lactobacillus paragasseri: LpgJCM5343_08260
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Entry
LpgJCM5343_08260 CDS
T05840
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LpgJCM5343_08260 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_08260 (recO)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LpgJCM5343_08260 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LpgJCM5343_08260 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BBD48473
LinkDB
All DBs
Position
855682..856434
Genome browser
AA seq
250 aa
AA seq
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MVRELCEVQGLIFKRKKYKEADVLAKIMTKDHGIFTIDVRGALRPKSRLGAATLNFSYGK
YIVNTNWKGISTLRTFKDVKQLDQLYLDLTKNAYSSYVLDLLDHAFVEYKDIGSFYDLIM
KALLKINSGEDAAVITQMVQLKLLNAYGVAPQLDRCLICGKVQGTFDYSLELGGIICSDH
FNSVSQRMHLDPKVVALIRTLALVDIDRLGKVKINPQLKKNSGKVIDRMYANYLDLNLKT
KKFLDELALF
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggtacgtgaactttgtgaggttcaaggattaatttttaaaagaaaaaaatataaagaa
gctgatgttctagccaagatcatgacgaaagatcatggtatttttacaatagatgttaga
ggagcactgagaccaaagtccagattaggagctgcaacccttaacttctcttatggaaaa
tatattgtaaatacaaattggaagggaatcagtacgctgcgaacttttaaggatgtaaag
cagttagaccaattatatttagatttaactaagaatgcgtattcgagttatgttttagac
ttgcttgaccatgcttttgttgaatataaggatattgggagcttttatgatttgattatg
aaagcgttgctgaagataaattctggagaagatgcggcagtcattacccaaatggtgcaa
ttgaagttgcttaatgcatatggagtagcaccgcagttagatcgatgtttaatttgcggg
aaggtgcaaggcacgtttgactattcgttggaattaggtggaattatttgtagtgatcac
tttaatagtgtcagtcaaaggatgcatctagatcctaaagtagttgctttgatacggact
ctagctttagttgatattgatcgtttaggaaaagtaaaaattaatccgcaattaaaaaag
aattctggcaaggttattgatcggatgtatgctaactatttagatcttaacttgaaaact
aagaagtttcttgatgaattggcgcttttttag
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