Lactobacillus paragasseri: LpgJCM5343_08540
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Entry
LpgJCM5343_08540 CDS
T05840
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw00220
Arginine biosynthesis
lpw00240
Pyrimidine metabolism
lpw00250
Alanine, aspartate and glutamate metabolism
lpw01100
Metabolic pathways
lpw01110
Biosynthesis of secondary metabolites
lpw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LpgJCM5343_08540 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LpgJCM5343_08540 (carB)
00220 Arginine biosynthesis
LpgJCM5343_08540 (carB)
Enzymes [BR:
lpw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LpgJCM5343_08540 (carB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BBD48501
LinkDB
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Position
883566..886754
Genome browser
AA seq
1062 aa
AA seq
DB search
MPKRTDIHKIMVIGSGPIIIGQAAEFDYSGTQACLALREEGYEVVLVNSNPATIMTDTTI
ADKVYIEPLTVESISRIIRQEYPDAILPTLGGQVGLNMALALAKTGILDELNIELLGTKL
SSIEQAEDREKFKELCKKLGEPVPPSRTVNTVEDALAFGDEIGYPIIVRPAFTMGGTGGG
ICHSHEELAEIAKNGLELSPVTECLIEKSIAGYKEIEFEVMRDHDDNAMIVCCMENFDPV
GIHTGDSIVFSPSQTLSDKEYQMLRDCSLRLIRALKIEGGCNVQLALDPNSFDYDVIEVN
PRVSRSSALASKATGYPIAKMAAKIAIGMTLDEIKNPVTGTTYAEFEPALDYVVCKMPRW
PFDKFSKADRTLGTQMKATGEVMAIGRTAEEAMQKAVRSLEIDEKDLYSEKAHRASDEEI
EQKLVRAQDDRLFYLAEAFRRGYSFEDVHELTKINFYFLDIVSHMVEMEKTIKENKDDLE
TLRLAKKYGFSDPTIAALWDEKADQVRDLRKKQNIIPVYKMVDTCAAEFESKTPYFYSTY
DGENESHKSGKKSVIVIGSGPIRIGQGVEFDYATVHCVKALQKMGYEAIVINSNPETVST
DFSISDKLYFEPLTLEDVLNVCDLEKPEGVIVQFGGQTSINLAAGLEKHGVKILGTTVKD
LNRAEDRELFDQIIKKLQLNQPKGLTATTHDGVIKAAEELGYPVLVRPSYVLGGKAMEIV
YNKSELEEYLHDHVDIAADHPILVDDYLDGRECDVDAICDGKDVLLPGIMEHIEHAGVHS
GDSMAVYPPQTFTDDVKEKIMDVTRKLALTLNCVGIMNIQFIVRNGEVYVIEVNPRASRT
VPFLSKITGIEMAQVATRVIMGESLAEQGYSDGLAPEPEMISVKAPVFSFSKLADVDSYL
GPEMKSTGEVMGSDHTFAKALYKAFAGAKMQLPENGNVLLTIEDRDKDKILPIAKRFARI
GYRIFATKGTADFLKNNGLHVDLVTKVHENENADDNILNELRDGKIDLVINTMGHDIEKN
SDGFIIRQMAIQQNVPLLTALDTADALLTSLENRSFATDALK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaacagatattcataaaattatggtgattggttctggtccaattattatt
ggtcaagctgctgagtttgattattcaggtactcaagcttgcttagctcttcgtgaagaa
ggttacgaagtggttttggtcaactcaaatccagcgacaattatgactgatacaaccatt
gctgataaggtttacattgaaccactaacagtagaatcaatttctagaataattagacag
gaatatcctgatgcaattctgccaactcttggcggccaagttgggttaaacatggcgcta
gctttggctaaaactggaattttagacgaattaaatattgaattactaggaacaaagctt
tcttcgattgaacaagcagaagatagagaaaaattcaaagaattatgtaaaaaattaggc
gaacctgttcctccttcaagaactgttaatacagtagaagatgctcttgcatttggtgat
gaaattggatatccaatcattgttagaccagcatttacgatgggtggaactggtggcgga
atctgccatagtcatgaagaattagctgaaattgctaagaatggtttagagctttctcca
gtgactgaatgtttaattgaaaaatccatcgctggctataaagaaattgagtttgaggta
atgcgtgaccatgacgataatgcaatgatcgtttgctgcatggaaaattttgatccagtt
ggtattcatacaggagattcaattgtcttttcacctagtcaaactttaagcgataaagaa
taccaaatgcttagagattgctctttacgtttaattcgtgctcttaaaattgaaggtggc
tgtaatgtgcagctagctttagacccaaatagttttgattatgacgtgattgaagttaat
ccaagagtgtcaaggtcaagtgctcttgcttcaaaagcaactggttatccaattgctaag
atggcagccaaaattgcaatcggaatgactttagatgaaattaagaatcctgtaaccgga
acaacttatgcggaatttgaaccagcattagactatgttgtctgcaaaatgccacgctgg
ccatttgataaattctctaaagctgatcgtactttgggtacacaaatgaaagcaaccggt
gaagtaatggcaattggtcgaactgctgaagaagcaatgcagaaagcagtaaggtcactt
gaaattgatgaaaaagatttatattcagaaaaagctcatcgggcaagtgatgaagaaatt
gaacaaaagctagttagagcacaagatgatcgtctcttttacttagctgaggcatttaga
agagggtacagttttgaagatgtacacgaattaacgaagattaacttttatttcttagat
attgtgagtcatatggttgaaatggagaagaccattaaagaaaataaggatgatcttgag
actttacgtttagctaaaaaatatggctttagcgatccaactatagctgctttatgggat
gaaaaggctgatcaagttagagacttacgtaaaaagcaaaatatcattccagtttataag
atggttgacacctgtgcagctgaatttgaatccaaaacaccttatttctattcaacttat
gatggtgaaaatgaatcacataagtctggaaagaaatcagttattgttattggttctggc
ccaattagaattggacagggagttgagtttgattatgccacagttcactgtgttaaagca
ctacaaaaaatgggttatgaagcaattgtaattaattcaaacccggaaactgtttcaact
gacttttcaatttcagataaactgtattttgaacctttaacattagaagatgtcttgaat
gtttgcgacttagaaaagccagaaggtgtcattgttcaattcggtggtcaaacttctatt
aatttagcagctggtttagaaaaacatggagttaagatccttggaacgacagttaaagat
cttaaccgtgcagaagatcgtgaactatttgaccaaattattaaaaagcttcaacttaat
caaccgaaaggcttaactgctacaacgcatgatggcgtaattaaagcagctgaagagtta
ggatacccagtcttagttcgtccaagttatgtgctgggtggaaaagcaatggaaattgtt
tataacaagagcgaactagaagaatatttacatgatcacgtagatattgcagcagatcat
ccaattttggttgatgattatttagatggtcgtgaatgcgacgttgatgcaatttgcgat
ggtaaagatgtactattgcctggaattatggaacatattgaacatgcaggtgttcactca
ggtgactcaatggcagtatatccaccacaaacatttactgatgacgtcaaagagaagatt
atggacgttactcggaaattagcgcttactcttaattgtgttggaattatgaatattcag
tttattgttagaaatggtgaagtttacgtaatcgaagtaaaccctcgggcaagtagaaca
gtgccgtttttgagtaaaataactggaattgaaatggcgcaagttgcaactagagtaatt
atgggtgaaagcttagcagagcaaggctacagcgatggtcttgctccagagccagaaatg
attagcgttaaggctcctgtgtttagctttagtaagttggcagatgtggattcatatctt
ggacctgaaatgaagtccactggtgaagtaatgggaagcgaccatacctttgccaaagca
ctttataaggcctttgcaggagcaaagatgcagctacctgaaaacggaaatgttttattg
acaattgaagatagagataaagataagattttaccaattgctaagcgttttgctagaatt
ggttatcgaatttttgcgacaaaagggacagctgactttttaaagaataatggcttgcat
gttgatctagtaaccaaagttcatgagaacgaaaatgcagatgataatatcttgaatgaa
ctgagggatgggaagatcgacttagtgattaatactatgggacatgatattgaaaagaac
tcagatggatttattattagacagatggctattcaacaaaatgttcccttgttaactgct
cttgacacagctgacgcgcttttaacttctcttgaaaatagatcatttgcgacagacgcc
ttaaaataa
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