Lactobacillus paragasseri: LpgJCM5343_09850
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Entry
LpgJCM5343_09850 CDS
T05840
Name
(GenBank) major facilitator superfamily transporter
KO
K08217
MFS transporter, DHA3 family, macrolide efflux protein
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpw02000
]
LpgJCM5343_09850
01504 Antimicrobial resistance genes [BR:
lpw01504
]
LpgJCM5343_09850
Transporters [BR:
lpw02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-3 (12 spanner) (DHA3) [TC:
2.A.1.21
]
LpgJCM5343_09850
Antimicrobial resistance genes [BR:
lpw01504
]
Gene variants
Macrolide resistance genes
Transporters
LpgJCM5343_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_3
MFS_2
Motif
Other DBs
NCBI-ProteinID:
BBD48632
LinkDB
All DBs
Position
complement(1018885..1020117)
Genome browser
AA seq
410 aa
AA seq
DB search
MHKNIYYSWASNFYRLFIGQGLASIISETVNYSLLFYLTSISKPATILSISEIISLLPIA
LFAPFAGVMADRVSKKKILIFSDTISLIVTLLLFLQAINSHNNLTIDLILISNLLRSTTI
SIQNPTIQSAVPELVPDDKLLKINGQYSSLQALNQFFPPILGGILYGLLSVDYILLLSGL
ANVIGICAVIITCFPRNEVNNANQRGFHLLFELKQGLHSIIQVTGLNRVIIYKAFSVAII
VPSTALYPLMTSEHFHGSLKFDAPLVEVSIALGMALSGLCMGNLNNLSHRLTPAGIGVLG
IGLSLFISGILPGNHYGFIIFIIINFIAGLCIPWIDAPAQTLLQDKIEHKNLGKVISFYL
MMIGLAGPAGLSLSSVISKFMSTAEIFIGSGILLILMLLVALFDRKLRSI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaatatatattattcatgggctagtaacttttatcgattatttattggccaa
gggctagctagtattatttcagaaactgtcaattatagtttgcttttttatcttacctca
atttcgaaaccagccactattttatctatttctgaaataatttctttattaccaatcgca
ttatttgctcccttcgctggcgtaatggcagatagagttagtaagaaaaagatacttatt
ttttctgatacaatcagtcttattgttactcttttactttttttgcaggcaatcaatagc
cacaataatctaacgattgatctaattctgatttcaaatttacttagatcaactactatt
agtattcagaatccgactattcaatctgctgtacctgaacttgtacctgatgataagctt
ttaaaaataaatgggcaatatagttcgcttcaagcacttaatcaattctttccgccgatt
ttaggtggaatattatatggattgctgtcagtagactatattcttttactatcaggactt
gcaaacgtaataggtatttgtgccgtaataattacatgctttccgaggaatgaagttaat
aatgcaaatcaacgaggctttcaccttctgttcgaattaaaacaaggtcttcatagtatt
attcaagttactggcctgaatagggtgattatttacaaggctttttccgtagctattatt
gtgccatcaactgctttatatccacttatgactagtgaacattttcatggatctttaaaa
tttgatgcgccgttagtggaagtttcaattgcattaggtatggcattaagtggtctgtgt
atgggaaatttaaataatttatcacatcgacttacacctgcaggtattggagtgctagga
atcggattaagtttgtttatttctggtatacttcccggcaatcattatggttttataatc
tttattattattaattttattgctgggttatgtattccttggattgatgcacctgctcaa
acattgcttcaagataagattgaacataaaaacttaggaaaggtgattagtttttattta
atgatgatcggattggccggacctgcgggtctaagtttaagtagtgtgataagtaaattt
atgtctactgctgagatttttattggatcaggaatactacttattttgatgcttttagtt
gctttatttgataggaagcttagaagtatttaa
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