Lactobacillus paragasseri: LpgJCM5343_10770
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Entry
LpgJCM5343_10770 CDS
T05840
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LpgJCM5343_10770 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lpw03011
]
LpgJCM5343_10770 (rpsA)
Ribosome [BR:
lpw03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LpgJCM5343_10770 (rpsA)
Bacteria
LpgJCM5343_10770 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BBD48724
LinkDB
All DBs
Position
complement(1128616..1129815)
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AA seq
399 aa
AA seq
DB search
MTDNSNQFLDALKEMQGVEVGNIVNVEVLSVEDGQIAVGVENAGVEGVITKREFTNDRNA
DLNQLVKPGDKFEALVLRRAGGDKENGEFFFSVTRLKEREAYKELEKVFEEGKTVEGTVT
GAVRGGLLVDVGTRGFLPASLISNRYVSDLKPYIGKKMNLKITEIDPNKNRLILSRKDLI
EKEREEAFENVASQLVVGDTVEGKVSRLTGFGAFVDVGGVDGLVHISEISYKHVDKPSDV
LKAGQDVKVKVIGIDDDRHRISLSIKQTLPSPFEEATEGLHEGDIIEGEVKTLTSFGAFI
EVADGIQGLVHVSEIANKHVDKPSDVLKVGQTVKVKVLSVDPSDRRISLSIKQADPNAAK
SENSRPRRRQDSVADKYMNDNDNGFALGDIIGDQLKDKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacagataatagtaatcaattcttagatgctctaaaagaaatgcagggagttgaagtc
ggcaacattgttaacgttgaagttttaagtgttgaagatggacaaatcgctgttggtgtt
gaaaatgcaggtgttgaaggtgtaatcactaaacgtgaattcactaatgaccgtaacgca
gatttaaaccaattggtaaaacctggtgataagtttgaagctttagttcttagaagagct
ggtggcgataaagaaaacggcgaattcttcttctcagttactcgtttgaaggaaagagaa
gcttacaaggaattagaaaaggtctttgaagaaggcaagactgttgaaggtactgtaact
ggtgctgttcgcggtggtttattagttgacgttggtacacgtggtttcttaccagcatca
cttatttctaaccgttacgtttctgacttgaagccttacattggcaagaagatgaacttg
aagatcactgaaattgatcctaacaagaacagattaattctttcaagaaaagacttaatc
gaaaaggaacgtgaagaagcattcgaaaacgttgcttcacaattagttgtaggtgatacg
gttgaaggtaaagtatcacgtttaactggttttggtgcctttgttgacgttggtggtgtg
gacggtttagttcacatttcagaaatttcttacaagcatgttgacaagccaagtgatgta
ttgaaggctggtcaagatgttaaggttaaagttatcggtattgatgacgatagacacaga
atctccctgtcaattaagcaaactttaccatccccatttgaagaagctactgaaggttta
catgaaggcgacatcattgaaggtgaagttaagactttaacttcattcggtgcattcatc
gaagtagctgatggaatccaaggtttagtacacgtttcagaaattgctaacaagcacgtt
gataagccaagtgatgttttaaaggttggtcaaactgttaaagttaaagttttgagcgtt
gacccaagtgacagaagaatctcattgtcaatcaagcaagctgatcctaatgctgctaag
agtgaaaactcacgtccacgtcgtcgtcaagattctgtagctgataagtacatgaatgac
aatgacaacggttttgctttaggtgacattattggtgatcaacttaaagataaggattaa
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