Lactobacillus paragasseri: LpgJCM5343_11170
Help
Entry
LpgJCM5343_11170 CDS
T05840
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw00521
Streptomycin biosynthesis
lpw00523
Polyketide sugar unit biosynthesis
lpw00541
O-Antigen nucleotide sugar biosynthesis
lpw01100
Metabolic pathways
lpw01110
Biosynthesis of secondary metabolites
lpw01250
Biosynthesis of nucleotide sugars
Module
lpw_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LpgJCM5343_11170 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LpgJCM5343_11170 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LpgJCM5343_11170 (rfbC)
Enzymes [BR:
lpw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LpgJCM5343_11170 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBD48764
LinkDB
All DBs
Position
complement(1165861..1166469)
Genome browser
AA seq
202 aa
AA seq
DB search
MGQIKVEKNVGGIEGLAVITPTVHGDDRGYFMETFNQRDMMEAGFSINFVQDNQSSSTKG
VLRGLHFQKKYPQIKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGF
AHGFLVLSDVAEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLKGDYPGSPDASGYTLDD
GTKLNMAERDQEWKGLKDTFKF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaattaaagttgaaaaaaatgttggtggtattgaaggtttagcagttattaca
ccaactgttcatggagacgatcgtggctacttcatggaaacttttaaccaaagagacatg
atggaggctggctttagcattaactttgttcaagataaccaatcaagttcaactaagggt
gtgcttcgcggtttacacttccaaaagaagtacccacaaattaaattagttcgcgcagtt
cgtggtagcgtatttgatgttgctgttgaccttcgtagtgaatctaagacttatggtaaa
tggtacggtgttgaattaactgcagaaaacaagaaacaattcttaattccacaaggcttt
gctcatggtttccttgttttaagtgatgtagcagaattttgttacaaagttaatgacttc
tggcacccaaacgatgaaggtggtatggcttggaatgatcctgaaattggcattgaatgg
ccacaccttaaaggcgattacccaggtagtccagatgcttctggttacactcttgatgat
ggtactaagctcaacatggctgaacgtgatcaagaatggaagggcttaaaggatactttt
aagttttaa
DBGET
integrated database retrieval system
