Lactobacillus paragasseri: LpgJCM5343_11400
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Entry
LpgJCM5343_11400 CDS
T05840
Name
(GenBank) transposase
KO
K07482
transposase, IS30 family
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LpgJCM5343_11400
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_30
CENP-B_N
HTH_28
HTH_7
HTH_Tnp_ISL3
GerE
HTH_29
HTH_3
HTH_24
HTH_11
HTH_20
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBD48787
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Position
1182407..1183456
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AA seq
349 aa
AA seq
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MDSLHSTMNQHVKGKHLSFEERVIIQLRLKDGCSLRAIARELNCSPSTISYEFKRGTVKL
YHGKVKRYKATQGHDVYQAHRKNCGRKSDFLKKTQFIHYVHKHFFKDGWSLDVCSNRATA
AGEFSSSDVVCTKTLYNYVDKGLLGIYNYDLPEKLKRNTKLHRVRKNKKKLGRSIEERPK
EISERNEFGHWECDLVLGHKTKDDEVLLTLSERMSREFLIIRIPDKTSISVMQAFKELQR
QYSEHWNNIFKTITTDNGSEFADLSNLEEASNTLVYYAHPYTSCDKGTVERHNGLIRRFI
PKGEAIANYSLQDIIDIETWCNSLPRMILAYHTPDEIFERELDLIYQIA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggactctttacattctaccatgaaccagcacgttaaaggaaagcatttatcattcgaa
gaacgagttattattcaattgcgtttgaaagatggctgctctttgcgtgcaattgctcgt
gaactcaactgttctccttctactatcagttatgagtttaaacgtggcactgtaaaactg
tatcatggtaaagtcaaaagatacaaggctactcaaggacatgatgtatatcaagctcat
cgtaaaaattgtgggcgcaaatcagactttctcaagaaaactcaatttattcactatgtc
cacaaacatttctttaaagatggttggtcgcttgatgtttgcagtaatcgtgccactgct
gctggcgaattctctagcagcgatgttgtctgcaccaaaactctttataattacgttgat
aagggcttattaggcatttataattacgacttgcctgagaagcttaaacgcaataccaag
cttcatcgtgtgcgcaaaaacaagaaaaagcttggcagaagtattgaagaacgtccaaaa
gaaattagtgaacgtaatgaattcggtcattgggaatgcgatttggttcttggacataag
actaaagatgatgaagtgctgttaaccttatctgagcgcatgagtcgtgaattcttaatt
attcgtattcccgacaagacttctatcagtgtcatgcaagcctttaaagaactccaaaga
caatacagtgaacactggaataatatttttaaaactattaccactgataatggttcagaa
tttgcggatctttccaacctagaagaagcctccaatacactggtttactatgcccatcct
tacacttcttgtgataagggaacagttgaaagacacaatggtcttattcgcagattcatt
cctaaaggagaagcaatagctaactattctttacaagacatcattgatattgaaacctgg
tgcaattctttgccaagaatgatactggcctatcatacaccagatgaaatctttgaaaga
gaattagatctaatctatcaaatagcttaa
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