Lactobacillus paragasseri: LpgJCM5343_12930
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Entry
LpgJCM5343_12930 CDS
T05840
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lpw
Lactobacillus paragasseri
Pathway
lpw03030
DNA replication
lpw03430
Mismatch repair
lpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LpgJCM5343_12930 (dnaQ)
03430 Mismatch repair
LpgJCM5343_12930 (dnaQ)
03440 Homologous recombination
LpgJCM5343_12930 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpw03032
]
LpgJCM5343_12930 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lpw03400
]
LpgJCM5343_12930 (dnaQ)
Enzymes [BR:
lpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LpgJCM5343_12930 (dnaQ)
DNA replication proteins [BR:
lpw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LpgJCM5343_12930 (dnaQ)
DNA repair and recombination proteins [BR:
lpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LpgJCM5343_12930 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
BBD48940
LinkDB
All DBs
Position
1330028..1330561
Genome browser
AA seq
177 aa
AA seq
DB search
MNFTAMDFETANSHPESACSLALVMVRNNEIVDRFYTVINPQMPFDGRNIRVHGITAEDV
KNAPTMAEVWPKIKKLYQPGMLVAAHNARFDCRVMEKSLARYNIPAPHYFAIDTLATSKA
FEPDLPNHKLDTVSEALNINLWHHHNALSDSEACAGILIEENKRVGDDPIKKMVKPI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaactttactgcaatggattttgaaacggcaaacagtcatcctgaaagtgcatgttct
cttgccttggttatggttagaaacaatgaaattgtcgaccgtttttatacagttattaat
ccgcaaatgccttttgatggtcgaaatatcagagttcatggtattactgccgaagacgtt
aaaaatgcaccaacaatggctgaagtttggcctaaaataaaaaaattgtatcaacccgga
atgttagtagctgctcataatgcacggtttgactgccgggtaatggaaaagtcgctcgcc
cgctataatattccagctcctcactactttgcaattgatactttagcaactagcaaggcg
ttcgaacctgatcttcctaatcacaaattagacacagtgtcagaagctttaaatattaac
ttatggcatcaccataacgctttaagtgatagtgaagcttgtgcgggaattttaattgaa
gaaaataaacgtgttggagatgatccaatcaaaaaaatggttaagccaatctaa
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