KEGG   Lactobacillus paragasseri: LpgJCM5343_13610
Entry
LpgJCM5343_13610  CDS       T05840                                 
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding protein
  KO
K03697  ATP-dependent Clp protease ATP-binding subunit ClpE
Organism
lpw  Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:lpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lpw03110]
    LpgJCM5343_13610 (clpA)
Chaperones and folding catalysts [BR:lpw03110]
 Heat shock proteins
  HSP100
   LpgJCM5343_13610 (clpA)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA AAA_5 AAA_16 AAA_22 Sigma54_activat TniB NBD_SMAX1 AAA_7 AAA_14 UVR nSTAND3 NACHT RNA_helicase ATPase_2 RuvB_N nSTAND6 IstB_IS21 NB-ARC TsaE Bac_DnaA Roc AAA_28 Torsin AAA_18 TrwB_AAD_bind ABC_tran DUF815 AAA_33 ResIII COG4_N nSTAND1 Zeta_toxin DNA_pol3_delta2 AAA_24 AAA_3 AAA_6 VG15 DUF7685 ZZ
Other DBs
NCBI-ProteinID: BBD49008
LinkDB
Position
1401854..1404022
AA seq 722 aa
MLCDNCHERPASIHLYTNVNGQDREISLCQQCYQELKNQQGQINNMNNNNAFFGDFDDLL
NALNNSNNEQNNSQERDPRMQMGGGRRGGNNGGQKSLLDQYGTDLTDLAKKGKIDPVIGR
DKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQQIVDGSVPAKLQDKRIISLNMV
SMVQGTGIRGQFEQRMQQLIKELEQNDNIILFIDEIHELVGAGNAEGGMDAGNIIKPALA
RGDFQLIGATTIKEYRNIEKDSALARRFQPVEVKEPTTEETVKILQGIRKRYEDYHHVHY
TDEAIQAAVALSSRYIQDRFLPDKAIDLLDEAGSRMNLTIPYVDSEKIKERLDAAENLKQ
EALKNEDYEKAAYYRDQIEKYEKLKDQKVDPDHTPQITEKIMNKIVEEKTNIPVGDLQKQ
EETQLKNLSTDLKDNVIGQNKAVETVARAIRRNRVGFNKSGRPIGSFLFVGPTGVGKTEL
AKQLAKQIFGTEDAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTERVRHNPYSLI
LFDEIEKAHPDVLHLFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKEANVGFAAE
NSHQEQFKNTLGQYFKPEFLNRLDDIVEFNSLDKKDLIKIVDLMLANTNNMVKDQGLHIE
VTPEAKELLVEKGYDPSMGARPLRRTIQEEIEDKVADYKLDNPAAKKLKASVVDNNIVIS
EN
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgctatgcgataactgtcatgaacgtcctgcctcaattcatctttatacaaatgttaat
gggcaagatcgtgaaatatcattatgccaacaatgttatcaagaattaaaaaatcaacaa
ggacaaattaataatatgaataataacaatgctttttttggcgattttgatgatttatta
aacgccttaaacaatagtaataacgaacaaaataactctcaagaacgggatccacgaatg
caaatgggtggtggacgtcgcggtggtaataacggtggtcaaaaatcattattagaccaa
tatggaactgacttaactgatctagcaaagaaaggaaaaattgatccagttattggacgt
gataaagaaatcgctagagttattgagatcttaaacagacgtaccaaaaacaatccagtt
ctaattggagaagccggcgttggtaaaacagccgttgttgaaggactagcacaacaaatt
gtcgacggatccgttcctgctaagctacaagataagcgtattatttcactaaatatggtt
tcgatggttcaaggtactggcattcgtggtcaatttgaacaaagaatgcagcaactaatt
aaagaacttgaacaaaatgacaatatcattttatttattgatgaaattcatgaattagtc
ggtgcgggtaacgctgaaggtggtatggacgctggcaatattatcaaaccagccttagct
cgtggagatttccaactaattggtgcaactaccatcaaagaatatcgaaacattgagaaa
gattctgctttagcacgtaggtttcaaccagttgaagttaaagaaccaactactgaagaa
acagttaaaattttacaaggtattcgtaaacgctacgaagattatcaccatgttcattat
actgatgaagcaattcaagctgccgttgccctttcatctcgttacattcaagatcgtttc
ttacctgataaagccattgaccttctagacgaagctggttcaagaatgaaccttaccatt
ccttatgtcgatagcgaaaaaatcaaagaaagattagatgcagctgaaaacttaaagcaa
gaagccttgaagaatgaagactatgaaaaagcagcatactatcgcgatcaaattgaaaaa
tatgaaaaattaaaagatcaaaaagtagatccagatcacacacctcagattaccgaaaag
atcatgaataagattgttgaagaaaaaactaatattcctgttggcgacctacaaaaacag
gaagaaactcaattaaagaacttatcaaccgatcttaaagataatgtaattggtcaaaat
aaagctgttgaaactgttgctcgcgcaattcgtcgtaaccgtgttggttttaacaagtcc
ggccgtccaattggctcattcctttttgtaggaccaactggcgttggtaaaacagagtta
gctaagcaattagctaaacaaatctttggtactgaagatgcgatgattcgttttgacatg
agtgaatatatggaacaatattcagtatctaagttaattggctctgctccaggttacgta
ggatacgaagaagcaggtcaattgactgagagagtacgtcacaatccttacagcttaatt
ctatttgacgaaattgaaaaggctcatccggatgtacttcaccttttcttacaaattctt
gacgatggtcgcttaactgattcacaaggtcgtactgtttcatttaaagacacaattatt
attatgacttctaatgctggtcaaggaattaaagaagcaaacgttggttttgctgctgaa
aacagtcatcaagaacaatttaagaatacccttggtcaatacttcaaacctgaattttta
aatagactagatgatattgttgaatttaattcacttgataagaaggacttaattaagatt
gtcgacttgatgcttgctaatactaacaatatggttaaagatcaaggtcttcatattgaa
gttactccagaagcaaaggaactacttgtagaaaaaggctatgatccatctatgggtgct
cgtcctcttcgtcgtacaatccaagaagaaatcgaagacaaagttgcagattacaagtta
gacaatcctgcagctaaaaaattaaaggctagtgtagtagataacaacattgtaatcagt
gaaaattaa

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