Lactobacillus paragasseri: LpgJCM5343_14520
Help
Entry
LpgJCM5343_14520 CDS
T05840
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpw03019
]
LpgJCM5343_14520 (yhaM)
Messenger RNA biogenesis [BR:
lpw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LpgJCM5343_14520 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
DUF1381
Motif
Other DBs
NCBI-ProteinID:
BBD49099
LinkDB
All DBs
Position
complement(1485306..1486283)
Genome browser
AA seq
325 aa
AA seq
DB search
MIKRLLDYNDGEDMDLVLLLKDSSLRTSKNGKQYLVLQFSDSSGTIRGNLWNASQQDADT
FSPGTIVELSGKREEYQDRPQIRIYDLRVVGPNEGYDLNQFVHSAPIKQKDLEEEINKRV
FEILNPTWNRIVRYLLKKWNKQFFSYPAGKSNHHAVRNGLAFHTVSMLRDAEGIANTYPQ
INRSLLYAGCILHDMGKVIELSGPVATKYTTEGNLIGHLVLIDEQIMLAAHELKIDEHSE
DLMLLRHLVLSHHGLPEYGAAHRPVVLEAEVLHKIDDLDATVYAITNALQQTKPGEFTET
IKSQDNRRFYRPKNDEALDQAPKLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaggttacttgattataatgatggcgaagatatggatttggttttactatta
aaggattcaagtcttcgcactagtaaaaatggtaaacaatatttagttttacaatttagc
gattcaagcggcacaattaggggaaacctttggaatgctagtcagcaagatgctgatact
tttagcccaggcactattgttgaattgagcggaaaaagagaagagtatcaagatcgtccg
cagataagaatttatgacctaagagtagtaggaccaaatgaagggtatgacttaaatcaa
tttgttcattctgctccaattaagcaaaaagatcttgaagaagaaattaataaacgtgtt
tttgaaattttgaatccaacttggaatcgaattgtgcgttacttgcttaaaaagtggaac
aagcaattcttttcatatccagcaggtaagtctaaccatcatgctgttagaaatgggtta
gcatttcatactgtttcaatgttaagggatgctgaaggaattgctaatacttatccacaa
atcaatcgttcgctcctttatgctgggtgtattttgcatgatatgggaaaggtgattgaa
ttatctggtcctgttgctactaaatacactactgaaggaaatttgattggtcacctagtt
ttaattgatgaacaaattatgctagcagcacatgaactaaaaattgatgaacatagtgag
gacttaatgcttttgagacatttagttttatcacatcatggattgccagaatatggagcc
gctcacagaccagtagttttagaagctgaagttttgcataagatcgatgatttagatgct
acagtttatgcaattactaatgctttgcagcaaactaaaccaggagaattcactgaaaca
attaagtcacaagataatcgtagattttaccgtcctaaaaatgatgaggctttagatcaa
gcaccaaaactagaataa
DBGET
integrated database retrieval system
