Lactobacillus paragasseri: LpgJCM5343_18230
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Entry
LpgJCM5343_18230 CDS
T05840
Symbol
trmE
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lpw
Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:
lpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpw03016
]
LpgJCM5343_18230 (trmE)
Transfer RNA biogenesis [BR:
lpw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LpgJCM5343_18230 (trmE)
Prokaryotic type
Methyltransferases
LpgJCM5343_18230 (trmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
GTP_EFTU
Ras
Csa3_N
Roc
AAA_16
ABC_tran
AAA_22
Maf1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BBD49470
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All DBs
Position
complement(1934321..1935706)
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AA seq
461 aa
AA seq
DB search
MAQVLTQFDTIAAISTPIGEGGISIVRLSGEDAVAIANKLFKGADLTKVPTHTIHYGHIV
DPKTQEVVDETMVSVLRAPKTFTREDMVEINCHGGMIVTNDILQLLLANGARMADPGEFT
KRAFMNGRIDLTQAESVMDIVRAKTDKSRQVAMTQLAGGLLEKIKTMRQELLDTMAHEEV
NIDYPEYDMDDLTSQEMKKKAQEVSKQIEQLLQTAQEGKIIRNGLATAIVGRPNVGKSSL
LNYLTQDDKAIVTDIAGTTRDTLEEYVSVKGVPLKLIDTAGIHHTEDKVEKIGVERSKKA
IKEADLVLLLLDASQDLTAEDKRLLDLTANKKRIIILNKQDLGTKISQEMIKNLTDNPII
VTSILKQKNMDALENAIEKLFFSGIENSQNQILVTNQRQAGLLAKAKQSLEDVISGINDA
MPLDLVQIDLKNAWDTLGEITGESAPDELITQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtattaacgcaatttgatacaatcgctgcaatttctactcctattggcgaa
ggaggaatttcaattgttcgtctatctggtgaagatgcagtagcgattgcgaataagctt
tttaagggagcagatttaactaaagttcctacgcatacaattcactatggacatattgtt
gatccaaaaacgcaggaagttgtcgatgagacgatggtcagtgtgttgcgtgcgccgaaa
acttttactagagaagacatggtagaaataaattgtcatgggggaatgattgttaccaac
gatattttgcaattgcttttggccaatggagccaggatggcagacccaggtgaattcact
aaacgtgcgtttatgaatggccgaattgatttaactcaagctgaatcagtaatggacatt
gttagagctaaaactgataaatctcgccaagttgcgatgactcaactagctggtggcttg
ctagaaaaaatcaagacgatgcgccaagagctgctcgatacaatggctcatgaagaagtt
aatattgattacccagaatatgatatggacgatttaacttctcaggaaatgaaaaagaaa
gcacaagaagtttcaaaacaaattgagcagttacttcaaacagctcaagaaggcaaaatt
atccgtaatggcttagcaactgcaattgtcggtagaccaaacgttggaaaatcatcgctc
ttgaactatttaactcaagatgataaagcgattgtaaccgatattgctggaactactaga
gatacgcttgaagagtatgtttctgttaagggtgttccacttaagctgattgataccgct
ggaattcaccacacagaagataaagttgagaaaattggcgttgaacgttctaagaaggct
attaaggaagctgacctagttcttttgctccttgacgcaagtcaagatttaacagctgaa
gataagagattattagatttgactgcaaataaaaagcggatcattattttgaataaacag
gacttaggtacgaaaatttcccaggaaatgatcaaaaaccttaccgataatcctattatt
gtaacgtcgatcttaaaacaaaagaatatggatgcacttgagaatgctattgagaaatta
ttctttagcggaatagaaaattctcaaaatcaaattttggtaacgaatcaacgacaagct
ggattattagctaaggcaaaacagtctttagaggatgtaattagcggaattaatgatgct
atgcctttagatttggttcaaattgatctaaaaaatgcttgggatactttaggtgaaatt
actggtgaaagtgcacctgacgaattaattacacagttatttagtcaattctgtcttgga
aagtag
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