Lactiplantibacillus paraplantarum: ASU28_02335
Help
Entry
ASU28_02335 CDS
T04156
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASU28_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpx03021
]
ASU28_02335
03019 Messenger RNA biogenesis [BR:
lpx03019
]
ASU28_02335
Transcription machinery [BR:
lpx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ASU28_02335
Messenger RNA biogenesis [BR:
lpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ASU28_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
NACHT
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ALO03286
UniProt:
A0A098R4X3
LinkDB
All DBs
Position
501110..502402
Genome browser
AA seq
430 aa
AA seq
DB search
MEKILTMHDLEQKTLKEIYNYAREYKISYYSQMNKKELSLAVLREQDKKRGFVQMEGVLE
IITQEGYGFLRPINYGPSQEDIYISQSQIHRFGLRNGDYVAGQARPPRPNERYYGLMRVG
TVNGKDPNEAKQRPHFPALTPLYPQKQIKLSTTASILATRLIDTFVPIGFGQRGLIVAPP
KAGKTTLLKNIANGIVANYPEAKLIMLLIDERPEEVTDLERSIKGEVVSSTFDQQPQNHV
RVAELVLERARRLVEDKQDVIILLDSITRLTRAYNLVIPSSGRTLSGGVDPTAFYKPKRF
FGSARNIEEGGSLTILGTALVDTGSRMDDMIYEEFKGTGNSELQLSRELAERRVFPALDL
KQSSTRKEELLVSRKNLEPVWQIRRSMTGNALEYTEQLLQFLKHTKTNTEFVRDLASLKF
TGQSTRRPRR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattttaacaatgcacgatctcgagcaaaagacgttaaaagaaatttataac
tatgctcgtgagtataagatttcttattattcacagatgaataagaaggagctctcgtta
gccgttctccgtgaacaggataaaaaacgtggttttgtgcaaatggaaggcgtcttggaa
attattacccaagagggctatggttttttgcggccgattaactacgggccttcacaggaa
gatatttatatttctcagtcgcaaattcatcgctttgggcttcgtaatggtgattacgtg
gcgggacaagcccggccaccacgacctaatgaacggtattatggcttgatgcgagttgga
acggtcaatggcaaggatcctaatgaggccaagcaacgccctcattttcctgcattaaca
ccgctctatccacaaaaacagatcaaattatccacgacggcatcaatcttagcgactcgt
ctgattgatacctttgtcccgattggctttggtcaacggggcttaattgtcgcccctcca
aaggctggaaagacgactttattaaagaatattgcgaatggaattgtggctaactatccg
gaagcgaagttgattatgttactgattgatgagcgaccagaagaagtgactgatttggaa
cggtcaatcaagggagaagtggttagttccacctttgatcagcaaccgcaaaatcacgtt
cgcgttgcagaattggtacttgaacgtgcgcggcggttagtcgaagacaaacaggatgtg
attatcttgctggactcgattacccgcctaacgcgagcttataatttggtcattccgtct
agtgggcggacattatctggtggggttgacccaacggcgttttataagcccaaacggttc
ttcggttcagcccggaatatcgaggagggcggtagcctaacgattttaggcaccgcgtta
gtcgatacgggtagccggatggacgacatgatttacgaagaattcaaaggaaccgggaac
tcagaattacaactatcccgtgaattagctgaacggcgggtcttcccagcgctagatttg
aaacaatccagcacacgtaaagaagaattattggttagtcgtaagaatttggaaccggtc
tggcagattcggcggtcaatgactggcaatgcgttagagtacaccgaacagctcttacaa
ttcttgaaacacacgaagaccaacactgagtttgttcgtgatttggctagcttaaagttt
actggtcaatcaacccggcggccgcgtcgttaa
DBGET
integrated database retrieval system
