Lactiplantibacillus paraplantarum: ASU28_04080
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Entry
ASU28_04080 CDS
T04156
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpx
Lactiplantibacillus paraplantarum
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_04080
DNA repair and recombination proteins [BR:
lpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ASU28_04080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
ABC_tran
Lon_C
AAA_22
AAA_16
AAA_24
SLFN-g3_helicase
AAA_30
nSTAND3
RecA
NTPase_1
AAA_14
DUF7125
Rad51
AAA
NPHP3_N
KdpD
AAA_5
AAA_19
DZR
NACHT
ATPase_2
Zeta_toxin
DUF7129
KTI12
HypA
Motif
Other DBs
NCBI-ProteinID:
ALO03595
UniProt:
A0A098RBX5
LinkDB
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Position
875887..877266
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AA seq
459 aa
AA seq
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MAKAKTQFVCSNCGYSTPRYLGRCPNCGEWNTLTEEHFDTKPDRKSRVSFAGKSAKPQRL
KEVSLTKTPRVKTKLKEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSGQLAETGGSV
LYVTGEESASQVKMRADRLAVSSEDFYLYPETDMSNIRSTIESTHPEFVVIDSVQTMQEP
DMDSAIGSVSQIREITAELLQIAKTNGITIFIVGHVTKGGAIAGPKILEHMVDTVLYFEG
DLHHTYRILRAVKNRFGSTNELGIFEMRTGGLYEVANPSEIFLEERLKDATGSAIVVSME
GTRPILVEVQALVTPTVFGNAKRTASGLDHNRVSLIMAVLEKRASLMLQNQDAYLKAAGG
VKLDEPAIDLAIAISVASSYRDQQTRPSDCFVGEVGLTGEIRRVNRIESRVGEAAKLGFK
RVFIPKNNLQGWDIPTGIEVIGVATLKEALQLALQQPNY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcaaaaacgcagtttgtttgttccaactgcggctattcgacaccacggtac
ttagggcggtgtccgaactgtggtgaatggaatacattaactgaagaacattttgatacg
aagccggatcgcaagtcccgcgtgagctttgctggtaagtcggctaagccacaacgactt
aaagaagtttcgttgacaaagacgccccgagtcaagactaagttaaaagaatttaaccgg
gtcttgggtggtggggttgtaccggggtcacttgttttaatcggtggtgatcctggaatt
ggaaagtcaacgttgttactgcaagtttctgggcaattggccgagacgggtggctctgtg
ttgtacgtgactggtgaagaaagtgcctcacaagtgaagatgcgggcggaccggttggct
gttagcagtgaagacttttatctttatcctgagactgatatgtcgaatattcgttcaacg
attgaatcgacgcatccagaatttgtggtcattgattcggtgcaaacgatgcaagaacct
gatatggactcggcaattggctcggtgtcacaaattcgggaaattacggccgagttactt
cagattgcaaagactaacggcatcactatttttattgtcgggcatgtgactaagggcggg
gccattgctgggcctaagatcttagaacatatggtggatacggtcttgtactttgaaggt
gatttacaccatacgtaccgcattttacgggcagtcaagaaccggtttggttcaacgaat
gaactggggatttttgaaatgcggacgggtggtttatatgaagtggccaatccgtcagaa
atcttcttggaagaacgtctgaaggatgccacgggttccgccattgttgtttcaatggaa
gggacgcgaccaatcttagtagaagttcaagcgctggtcacaccaacggtctttggtaat
gccaagcggacggcgagtggcttagatcataatcgggtttcgctaattatggcggtactg
gaaaaacgggctagtctgatgttgcaaaatcaagacgcgtacttaaaagcggctggtggg
gtcaagttggatgaaccggcaattgacttggcgattgccatcagtgtggcttctagttat
cgggaccagcaaacccgcccaagtgactgttttgttggtgaagtgggcttgactggtgaa
attcgtcgagttaaccgaattgagtcacgggttggtgaagcagccaaacttggatttaag
cgagtctttattccaaagaataatctacaaggctgggatataccaactgggattgaagta
attggggtcgcaacgttaaaagaagcactccaattagcattacaacaaccaaattattaa
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