Lactiplantibacillus paraplantarum: ASU28_04665
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Entry
ASU28_04665 CDS
T04156
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASU28_04665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_04665
Enzymes [BR:
lpx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ASU28_04665
DNA repair and recombination proteins [BR:
lpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ASU28_04665
Prokaryotic type
ASU28_04665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Motif
Other DBs
NCBI-ProteinID:
ALO03701
LinkDB
All DBs
Position
1000681..1001373
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AA seq
230 aa
AA seq
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MKAFIHTDWWDVLKLEFEKPYYHQLHEFLKNEYRTKNIHPDMYNIFQAFEWTPFADTKVV
ILGQDPYHGPGQAHGLSFSVLPGVAVPPSLVNIYKELQDDVGCTPVDHGYLESWAKQGVL
LLNSVLTVQNGVAFSHAGKGWEQLTDVAIRRLSERSTPVVFILWGKAARSKIKLIDTQTN
VVLQAPHPSPLSAYRGFFGSKPFSKTNIALTSFGEQPINWQLPEHVNLEH
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtttattcacacggactggtgggacgtcttaaaactagagtttgagaagccg
tattaccaccaattacacgaatttttgaaaaatgaataccggacgaaaaatattcaccca
gatatgtataatatttttcaggcctttgaatggacgccgtttgcagatacaaaggttgtt
attttaggtcaagacccatatcatggccctggtcaggcacacggactgagcttttccgta
cttcccggtgtggctgtgccaccatcgttagttaacatctacaaagaattacaagacgat
gttggctgtacgccggtagatcatggttatttggagagttgggccaagcagggggtccta
ttactgaactctgtgttgactgttcaaaatggcgtggctttttcccatgctggtaagggc
tgggaacaactgaccgacgttgctattcgacggttatcagaacggtcaaccccagtggtc
tttattttatggggcaaggcagcgcggtctaagattaagctgattgatacgcagacgaac
gtggtgttacaagcaccgcatcctagtccactgtcagcttatcgtggcttcttcggttct
aaaccattttcaaagactaacattgcgttaacatccttcggcgaacagccaattaattgg
cagttaccagagcacgtcaatctagagcattaa
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