Lactiplantibacillus paraplantarum: ASU28_06405
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Entry
ASU28_06405 CDS
T04156
Name
(GenBank) exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lpx
Lactiplantibacillus paraplantarum
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_06405
DNA repair and recombination proteins [BR:
lpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASU28_06405
Archaeal homologous recombinant proteins
ASU28_06405
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ALO04004
LinkDB
All DBs
Position
complement(1382612..1383793)
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AA seq
393 aa
AA seq
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MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV
TSLDRMLQAINIEHHLPIYAIAGNHDGAKRLNYGREWLAYNNFHINTLLAEAFTPIETPT
AQIFMLPFFDPIDARVYYQQQGLPEKQVKAIHTIHDAMQRVVSDLVATFDPKKRHLLITH
FTVTPKVDDDLELTSETTSKVGGLATLTTDLFADFDYVMLGHIHTRLASPDKDRIRYAGS
PVKFNVKEANPKLHGKGVEIVTITPTAITHEFQPIQPQTDLVTLRAPWETLLDPNFYQQQ
PLKQAWFAITVQEFDRSKHLNVRAQLEQIYGTIVELDYESNHQTTAISGPKNMNELSPDA
IVGQFFHAITGNQLSTTQQQLVDQIFVNLRKED
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagttactacatacagcggattggcacatcggccggacgcttaacggttattctttg
ttagatgaacaggaagcagcgttcaagcaaattctaacgattgcattggctgaaaaagtt
gatggtatcgtgattgctggggatatctacgatcgggccgttccaagtaccgacgcggtc
acttcactcgaccgcatgctgcaggctattaatattgagcatcacctaccaatctatgcc
attgctggcaaccatgatggcgccaagcgtctcaactacggtcgtgaatggctagcctat
aataattttcatatcaatacgttactagctgaggccttcacgcccatcgaaactccaacg
gcccaaatctttatgttaccgttttttgatcccattgacgcgcgggtctactatcagcaa
caaggtttgcccgaaaaacaagtcaaggcgattcacaccattcacgatgcgatgcaacgc
gtggttagtgacctcgttgccacctttgatcctaaaaaacggcacttgttgattactcat
tttaccgttacacccaaagtggatgacgacttggaattaacaagtgaaacaacttccaaa
gtgggcggtttggcgacgctgaccaccgatttattcgcagacttcgattatgtgatgctg
ggccatattcacactcggttagcctcacccgacaaagatcgaattcgttatgccggtagc
cccgtcaaatttaacgtcaaggaagccaaccctaagttacatggcaaaggtgttgaaatc
gtgacaatcacccccactgcgatcacccatgaattccaaccaattcagcctcaaactgac
ttggttacgttgcgtgcgccttgggaaacgttacttgatcccaacttttatcagcaacag
ccgttaaagcaggcttggtttgcgatcaccgtccaggaattcgaccgtagtaagcatctg
aacgtccgggcgcaactcgaacaaatctacggcaccattgtcgaattggactacgaatcg
aatcaccaaaccaccgccatcagtggtcccaaaaacatgaacgaactgagtcccgatgca
attgttgggcaatttttccacgcgattactggtaaccaactctcaacgacacaacaacaa
ctcgttgaccagatttttgtcaacttaagaaaagaggattag
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