Lactiplantibacillus paraplantarum: ASU28_08345
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Entry
ASU28_08345 CDS
T04156
Symbol
dnaE
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx03030
DNA replication
lpx03430
Mismatch repair
lpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASU28_08345 (dnaE)
03430 Mismatch repair
ASU28_08345 (dnaE)
03440 Homologous recombination
ASU28_08345 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpx03032
]
ASU28_08345 (dnaE)
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_08345 (dnaE)
Enzymes [BR:
lpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASU28_08345 (dnaE)
DNA replication proteins [BR:
lpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASU28_08345 (dnaE)
DNA repair and recombination proteins [BR:
lpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASU28_08345 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALO04358
LinkDB
All DBs
Position
complement(1790527..1793877)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSQYVPLQVLSTFSLLQSTSTVNELVQTAKQHGYSALALTDIDIMYGIVDFYNACRQAEI
TPVLGITLNLLGRDLTDQTFGLVVLAKDRTGYQNLMRLSTMKQTATAEGLPLTAVLPYLD
HLMVLTPAKDSELAALLLQDSADRAANWVATLVQAVDPDSLYLGVSLDQAPALRTTMTDF
AHQQQLSVIALDPVDYVQAKDYFAVSVLRAIDRGQQIEQPETLQGIEGSHYLRPANMVAA
DYDQLGLKGALDATTEVAAQCRVELQFQQPQLPQFPTPDEQPANVYLRQLCAAGLKQRLA
AMTEPVDQQSYQDRLNHELTVIDQMGFDDYFLIVWDVMNFAHEANITTGPGRGSAAGSLV
AYVLNITDVDPLQYNLLFERFLNAKRANMPDIDLDIPDNRREQVLNYVHDKYGHDRVAQI
ITFGTLAAKQALRDVGRVFGLSTYEMSDWSAAIPNQLHITLQQAYQSSQRLQNLVADSTK
NKLLFETAQRLEGLPRHYSTHAAGVVLSQKPLIQIVPLQAGSEAMMMTQYTKDTVEAVGL
LKMDFLGLRNLSLMASALHYVQRQTGKSLAITKINLNDPATLKLFQAGDTTGVFQFESAG
IRNVLRRLHPDNFELVAAVNALYRPGPMENIDHFIARKQGQEPVSYPAEQLAPILGPTYG
ILVYQEQVMQVAAVMGGFTLGEADLLRRAMSKKKHAVIDKMRQQFIAGAQQNGYSETVAT
QVYQYIEQFANYGFNRSHAIAYSKMAFELAYLKVHYSGAFFTSLMNSVLGNGTKLKQYLA
EARQHQVAIIPPDINRSGQYFDWNGQAIVFGLSSIKGLRRDFIASVLDERQANGSFKNLQ
QFMQRIDAKWLKVDLMNALIYAGAFDHFGLNRAELLTSVPELMSSAELAGDSMTLFESLA
PKIKKQPELPLSERLAKEAEYLGVYVSGHPVEAYDWLAQQRHTQLVSTLTSEQPAQILVY
ITKVRTIRTKRGQPMAFATGSDLSGEIDLTIFPNTYQRIQAELKPEAIVLISGKVEQQRD
LQVIVNTWQLAEQLPKPTGQLFLRLQPEQATATVQKEILKILSQYQGPNPVLIYSAAAHR
TVELNSQYWVAENPDLVGALTTLLGRDNVVMKNAIP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcagtatgtcccattacaggtattgagtacgttcagtctgttacaaagtactagc
accgtcaatgagctagtccagactgctaagcaacatggttattcagcactggctttaacg
gacatcgatatcatgtacggtattgttgatttttacaatgcttgtcgccaggcagaaatt
accccggtcttaggcattacattgaatttgttagggcgtgacttaacggatcaaacgttc
ggtttagtggtccttgctaaagatcgaacgggttatcaaaatttgatgcggttgtcgacg
atgaagcaaacggctacggctgagggattgccgttaacggcggtcttaccctatttggat
cacttgatggtattaacgccagctaaagacagtgaattggccgccttactgttacaagat
agcgctgaccgggctgctaattgggtcgccacactcgtacaagccgtcgatcctgatagc
ctttacttgggcgtttctttggaccaagcacccgcactgcgaacgacgatgactgacttt
gcccaccaacagcaattgtcggtaattgcgttagatccagtcgactatgttcaagcaaag
gattattttgccgtctcagttttacgggcgatcgatcggggacagcagatcgaacagcct
gagacgttacaaggtattgaagggagtcattacttacggccggctaatatggtggccgcc
gattacgatcaactcggattgaaaggtgcgcttgatgctacgaccgaagttgcggcgcag
tgtcgagtggaattacaatttcagcagccgcagttaccgcaatttccaacgcctgatgaa
cagccggccaatgtctatttacggcagttatgtgcggctggcttaaagcagcgcttagcc
gccatgacggagcccgttgatcaacagagctatcaagatcgcttgaatcatgaactaacc
gtgattgatcagatgggctttgatgattactttctgattgtgtgggatgtgatgaatttt
gcccacgaggctaatatcacgacgggccctggacgggggtcggcagcggggtcattagtc
gcttatgtgcttaatattacggatgtcgatccgttacaatataacttgttatttgaacgt
tttttgaatgctaaacgggctaatatgccggatattgacttagacattcctgataaccgt
cgtgagcaagtcctcaattatgttcatgataagtatggccatgaccgcgtcgctcaaatc
atcacgtttgggactttggccgccaagcaggctttacgcgatgttggtcgggtctttggg
ttatcaacttatgagatgagtgattggagtgcggcgatccccaaccagttacacatcacg
ttacagcaggcttatcagagttcacaacgtttgcaaaatctagttgctgattcgactaaa
aataaattgctatttgaaaccgcacaacgcctggagggcttgccgcgacattactcgaca
catgcggcgggggtcgtgttaagtcaaaagccgttgattcaaattgttccattacaagcg
ggtagtgaagccatgatgatgacccagtatactaaggacaccgtcgaagcggttggttta
ttaaagatggatttcttaggattacgaaatctatctttaatggccagtgcgctacattac
gttcagcgccaaactggcaagtccttggccattactaaaatcaatttgaatgacccagcg
accttaaaattatttcaggccggtgatacaacgggggtcttccaatttgaatcggctggt
attcgcaatgttctccgacggctacatccggataattttgagttggtcgcagcggtcaat
gcactataccggccaggaccaatggaaaatattgatcattttattgcccgaaaacagggc
caagaacccgtcagctatccagcggaacaactcgcgccaattttaggaccaacgtacggt
attttggtctatcaagaacaagtcatgcaagttgcggcggtcatgggtgggtttacactg
ggcgaggccgacttattgcggcgtgctatgagtaaaaagaagcatgcggtgattgataaa
atgcggcagcaatttatcgccggtgcacaacaaaatggttattctgaaactgttgcgacc
caggtttatcaatatattgagcaatttgctaattatggtttcaaccgttcacacgcgatt
gcttatagtaagatggcctttgaattggcctacttgaaggtccattattcgggagcgttc
tttacttcgttgatgaactcggtattaggcaacggaactaagttaaagcaatatttagcg
gaagctcgccaacatcaagtagccatcatcccaccagatattaaccgtagtgggcaatat
tttgattggaatggtcaagccatcgtgttcgggttaagttcaatcaagggcttgcgacgt
gattttattgctagtgtgctcgatgaacgccaggccaacggctcgtttaaaaatcttcag
cagtttatgcaacgcatcgatgccaagtggctcaaagtcgatttaatgaacgcgctgatt
tatgccggcgcgttcgatcactttggtctgaaccgtgcggagttactgaccagcgtgcca
gagctgatgtccagtgcggagttagccggggacagtatgacgttgttcgaatcactggca
cctaaaatcaaaaagcaacctgaactcccgttaagtgagcgattagctaaggaagcggaa
tatcttggcgtgtacgtctcagggcacccagtagaggcgtatgattggctggctcaacaa
cgacatacgcaattagtcagtacgctcacgagtgaacaaccggcccaaatattggtctat
attacaaaagtccgaacgattcggactaagcgtggtcaaccgatggcgtttgcaactgga
agtgatttgtctggtgagatcgacttgacgatttttcccaacacttaccaacggattcag
gcggaattgaaaccggaagcgattgtgttgattagtggtaaggtcgagcaacagcgggac
ttacaagtgattgtaaacacttggcagctggcagaacaattgcctaagccaaccggtcaa
ctctttttacgcttacaacctgagcaggcaacggcgactgtgcaaaaggaaattttaaag
attttaagtcagtatcagggccccaatccagttttaatctactcggccgcggcgcatcga
acagttgaactaaattcacagtattgggtcgcggaaaatcccgatttagttggagcgctt
acaaccttattaggtcgcgataatgtcgtgatgaagaacgctatcccttga
DBGET
integrated database retrieval system
