Lactiplantibacillus paraplantarum: ASU28_09090
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Entry
ASU28_09090 CDS
T04156
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU28_09090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_09090
DNA repair and recombination proteins [BR:
lpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU28_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
GIY_YIG_2
5_3_exonuc
AbiGii_2
HHH
IMS_HHH
Nop
Motif
Other DBs
NCBI-ProteinID:
ALO04497
UniProt:
A0A370A9X2
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Position
complement(1952910..1954724)
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AA seq
604 aa
AA seq
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MASAHIEHKLSLLPDLPGCYLMKNLNSQIIYVGKAKNLKNRVRSYFKSSHTGKTARLVSE
IADFEFIVTSTDKEAFLLEITLIQKHQPYFNIKLKKGTGYPYIKITNERDPQILIVSDVR
KDGGYYFGPYPNVYAAQETVNFIQKVYPLRRCHGFQNRPCLYYHMGQCLGACFKTVPTTE
YDAQIKRIKSFLNGHVETVKKQLTKRMDKAAAELEFERAAELRDQLNYIEMTVEKQKIIS
NDNTPRDLFNFYLDKGWLSIQVFFIRQARLMKREKRLFPVVSTAPEEMTSFILQFYNRKN
NVLPREVLVPNGLDKQVLSDILGIPVRTPQRGQKKDLLDMAQKNARIVLEEKFRLLELDE
RKTTGAMQEITDALGIPAGHKIEAFDHSHIQGADLVSAMVVFTDGQPNKKLYRKYKLRTV
DHADEAASTREVIRRRYTRLLKEHTALPDLILMDGGEIQLEAAKDVLENELGIATPVAAM
VKNDHHKTADLLASAGDQHLHLDPKSQGFYLLQRIQDEVHRFAITFHRQVHTKHSLSSRL
DEIPGVGPKTRNKLLRKFGSMSKIAGASIEEIQALGIAKSVAQTVKFSLAGGGVTPKHYQ
KGAT
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgcgcatattgaacataaattatctttgttaccggacttaccgggctgttat
ctgatgaaaaacttaaatagtcagattatttacgttggtaaggccaaaaacttgaaaaac
cgggtgcgttcgtattttaaaagtagccataccggcaagacagcacggttagtttcggag
attgcggattttgaatttattgtgacttcaacggataaggaagccttcctgttagaaatt
acgttgattcagaagcaccaaccttattttaatattaaactaaaaaaagggaccggttat
ccgtatatcaagatcaccaatgaacgtgatcctcaaatcttaattgtgagcgatgttcgt
aaagatggtgggtattattttggcccatatccgaatgtttacgctgctcaagagacagtc
aactttattcagaaagtttatccgttacgccggtgtcatgggtttcaaaatcggccatgt
ctgtactatcatatgggtcaatgcctcggtgcgtgcttcaagacagtaccaacgacggag
tatgacgcgcagatcaaacgaattaaatcctttttaaatggacacgttgaaacggtcaag
aagcaattaacgaaacgaatggacaaggcagctgccgaattagaatttgaacgggccgcc
gaattgcgtgatcaattgaattacattgagatgaccgttgaaaaacaaaagattatttcc
aatgataacacgccgcgtgatttgtttaacttttatttggacaagggttggctttcaatt
caagtcttctttattcgtcaagcacggctgatgaaacgtgagaaacgcttgtttccagtc
gtatcgacggcaccagaagaaatgacgagttttatcctgcaattttataaccgcaagaat
aatgtgttgccacgcgaagtgctggttcccaatgggctggataaacaggttttaagtgat
attttgggtattcccgtgcggacacctcagcgcgggcagaagaaagatttgttagacatg
gctcaaaagaacgcgcgcatcgttttggaagaaaagttccggttgctggagttggatgag
cgcaagacaactggtgcgatgcaggaaattactgacgctttaggtattccagcgggtcat
aaaattgaagcgtttgaccactcccatattcagggagcggacttagtttcagcgatggtc
gtcttcacagacgggcaaccgaacaagaagttgtaccgaaagtataagttgcggacggtc
gatcatgcggatgaagcagcttcgacccgtgaagtgattcgacggcgttatacacggttg
ttgaaggagcatacagcgttaccagacctgattttgatggatggtggcgagatccaactt
gaagcagctaaggacgtcttagagaacgaattaggaattgcaacgccggttgcggcgatg
gtcaagaacgatcatcacaagacggcggacctcctcgcatcggccggtgaccaacaccta
catcttgatcctaagagtcagggcttctacttactacaacggattcaggatgaagtgcac
cgtttcgccattacgttccaccgtcaagtgcatactaagcattcgttgagttcacggtta
gatgaaattcctggcgtggggcctaagacgcggaacaagttattgcgcaaattcggttcc
atgagtaagattgctggcgcctcaattgaggagattcaggcattagggattgctaaaagc
gtcgcacagactgtgaagttctcactagccggtggtggcgtgacgccgaaacattatcaa
aaaggggccacataa
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