Lactiplantibacillus paraplantarum: ASU28_09355
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Entry
ASU28_09355 CDS
T04156
Name
(GenBank) tRNA-specific 2-thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
ASU28_09355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpx03016
]
ASU28_09355
Enzymes [BR:
lpx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
ASU28_09355
Transfer RNA biogenesis [BR:
lpx03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
ASU28_09355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
Asn_synthase
QueC
ThiI
DUF7411
Arginosuc_synth
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ALO04548
LinkDB
All DBs
Position
complement(2015980..2017104)
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AA seq
374 aa
AA seq
DB search
MTDHSNTRVVVGMSGGVDSSVVALLLKQQGYDVVGVFMKNWDDTDENGVCTATEDYKDVA
KVADKIGIPYYSINFEKEYWDRVFTYFLDEYKKGRTPNPDVICNKEIKFKAFLDYAMDLG
ADYIATGHYARLQHDEDGTMHLLRGVDSNKDQTYFLSQLDSKTLQKVMFPLGEMVKPDVR
KLALNAGLATAKKKDSVGICFIGEKNFKEFLGHYLPATPGKMMTFDGEVKGEHAGLMYYT
IGQRRGLGIGGDGEDNEPWFVIGKDLKKNILYVGKGYHNPHLYATHLKASDLHFVTNEDL
GNDFHVTAKFRYRQKDSGVTVHFNDDHTEVTVTFDDPVRAITPGQAVVFYNGEECLGSGM
IDAAYNDERVLQYV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcacagtaacacccgtgtcgttgtcggcatgagtggtggtgttgattcatcc
gtcgtggctttactcttgaagcagcaaggttacgacgtggtaggcgtgtttatgaagaat
tgggacgatacggacgaaaatggtgtttgtaccgcaactgaagattataaagacgttgcc
aaagttgcggataagattgggatcccttattattcaattaactttgagaaggagtattgg
gatcgggtcttcacgtatttcttagacgaatataagaagggccgcactccgaaccccgat
gttatctgcaataaggaaattaagttcaaggcgtttctggattacgccatggatttaggt
gctgactacattgcaactggtcattatgcgcgtttgcagcatgatgaagatggtacgatg
catcttttacgaggcgtcgatagtaacaaggaccaaacttatttcttaagtcaattagat
tcaaaaaccttacaaaaggtcatgttcccacttggggagatggttaagccagacgtgcgc
aagttagctttaaacgcgggcttagcaacggccaagaagaaggattccgttgggatttgt
ttcatcggcgaaaagaacttcaaggaattcttgggtcattacttacccgcaacacctggt
aagatgatgacgtttgacggcgaagttaagggcgagcatgctggcttgatgtattatacg
attggtcagcgacgtggtcttggtattggtggtgatggtgaggataacgagccatggttc
gtgattggtaaggacctcaagaaaaatattttgtatgtcggcaagggataccataaccca
cacctatatgccacgcatttaaaggcctctgatcttcattttgtgactaacgaggattta
ggcaatgatttccacgtaacggcgaagttccgctaccgtcaaaaggattccggtgtgact
gttcattttaatgatgaccacactgaagtcacggtaacctttgatgatccggtccgggcg
attacgccaggacaagcggtggtcttttacaatggtgaggaatgcttaggttccggtatg
attgatgctgcttataatgatgagcgcgtcttgcagtatgtttaa
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