Lactiplantibacillus paraplantarum: ASU28_09965
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Entry
ASU28_09965 CDS
T04156
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lpx
Lactiplantibacillus paraplantarum
Pathway
lpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASU28_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpx03019
]
ASU28_09965
Messenger RNA biogenesis [BR:
lpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASU28_09965
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF7262
Motif
Other DBs
NCBI-ProteinID:
ALO04644
UniProt:
A0A098R1N9
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All DBs
Position
complement(2123607..2125166)
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AA seq
519 aa
AA seq
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MNVFGIILAVIAIVVGYGIGYYVRKNVHEKELDVAKNTAEGIISEAKRAAETHKKEKVLE
AKEESHRYRAEVETELKQRRNEVQKQEDRLLQREETLDHKENTFEKREDALGKKEDKIAN
EQKRVEQQQQSAASLITQRQAELERVAALSQEQAREQILTQTREQLTHERAVLIKENTDE
VKAQSEKEAKNLIVQAIQQSAADMVSETTVSVVALPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGYDPIRREIAKIALEKLIQDGRIHPARIEEMVEKARKEMDEKIRE
TGEQAVFDLGLHGMHPDLIKLVGRLNYRTSYGQNVLNHSIEVAKLAGVLAAELGEDVTLA
KRAGLLHDIGKAVDHEVEGSHVEIGVELTTKYKESPVVINTIASHHGDVEAKSIIAVLVA
TSDSISAARPGARSESLENYIHRLEKLEAIANNEDGVKKSYAIQAGREIRVIVKPNEISD
LQATVLAHDVKKQIENELEYPGHIKVTVIREVRAVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttcggtataatcctcgcagtcatcgcaattgttgtcggttatgggattggt
tactatgtacgcaagaacgtccatgaaaaagaattggacgttgccaagaacacagccgaa
ggtattatttctgaggccaaacgggcagcggagactcacaagaaagaaaaagtccttgaa
gctaaggaagagagtcaccgttaccgggctgaagttgaaacagagttaaagcaacgccgg
aatgaagtgcaaaagcaagaagaccggttgcttcaacgtgaagaaactttagatcacaaa
gagaatacttttgaaaagcgcgaggatgctttaggcaaaaaagaagataaaattgccaac
gagcaaaaacgtgttgaacaacagcaacaaagtgcagcttcactaatcacgcaacgtcaa
gctgagttagaacgggtcgcggccttgtcacaagaacaagctcgcgaacagattttgacc
caaacgcgcgaacaattaacgcatgaacgggccgtattaattaaagaaaatacggacgaa
gtgaaagcgcagtctgaaaaagaagccaaaaacttaattgtccaagcgattcagcaaagt
gccgccgatatggtctcagagaccacggtatcggtcgttgctttgccgaatgacgacatg
aaaggccggattattggccgggaaggtcgtaacattcgaacgttggaaactttgacgggg
attgatttaattatcgatgacacgccagaagccgtcgttttaagtggttacgatccgatt
cgtcgtgaaatcgcaaagatcgcgcttgaaaaactgattcaagacgggcggattcatcca
gctcggattgaagaaatggttgaaaaagcacgtaaggaaatggacgaaaaaatccgtgaa
accggtgaacaagccgtctttgacttaggtttgcatgggatgcatcctgatttaatcaag
ctagttggtcggttaaattatcggaccagttatggtcaaaatgttttgaatcactcaatt
gaagttgcgaagttggcgggcgtgttggccgctgaacttggtgaagatgttacactcgcg
aaacgcgcaggattattacacgatattggtaaggccgtcgatcatgaggtcgaaggatcc
cacgttgaaattggcgtggaattaacaacgaagtacaaagagagtcccgtcgtgattaac
acgattgcgtcccatcatggtgatgtggaagctaagtcgatcattgcggtattggttgcg
acgtctgattcgatttcagccgcccggccaggtgctcggagcgagtcgctggagaattat
attcaccggctcgaaaagctagaagcgatcgctaataatgaggatggggtcaagaagagt
tatgccatccaagctggtcgtgaaattcgggtcatcgttaagccaaatgaaatttctgat
ttacaggcaactgttttggcgcacgatgttaaaaagcagattgaaaatgaacttgaatat
cccggtcatattaaggttacggttattcgggaagttcgagcagttgattacgctaaataa
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