KEGG   Lactiplantibacillus paraplantarum: ASU28_09965
Entry
ASU28_09965       CDS       T04156                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lpx  Lactiplantibacillus paraplantarum
Pathway
lpx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ASU28_09965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpx03019]
    ASU28_09965
Messenger RNA biogenesis [BR:lpx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ASU28_09965
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 DUF7262
Other DBs
NCBI-ProteinID: ALO04644
UniProt: A0A098R1N9
LinkDB
Position
complement(2123607..2125166)
AA seq 519 aa
MNVFGIILAVIAIVVGYGIGYYVRKNVHEKELDVAKNTAEGIISEAKRAAETHKKEKVLE
AKEESHRYRAEVETELKQRRNEVQKQEDRLLQREETLDHKENTFEKREDALGKKEDKIAN
EQKRVEQQQQSAASLITQRQAELERVAALSQEQAREQILTQTREQLTHERAVLIKENTDE
VKAQSEKEAKNLIVQAIQQSAADMVSETTVSVVALPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGYDPIRREIAKIALEKLIQDGRIHPARIEEMVEKARKEMDEKIRE
TGEQAVFDLGLHGMHPDLIKLVGRLNYRTSYGQNVLNHSIEVAKLAGVLAAELGEDVTLA
KRAGLLHDIGKAVDHEVEGSHVEIGVELTTKYKESPVVINTIASHHGDVEAKSIIAVLVA
TSDSISAARPGARSESLENYIHRLEKLEAIANNEDGVKKSYAIQAGREIRVIVKPNEISD
LQATVLAHDVKKQIENELEYPGHIKVTVIREVRAVDYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgaatgttttcggtataatcctcgcagtcatcgcaattgttgtcggttatgggattggt
tactatgtacgcaagaacgtccatgaaaaagaattggacgttgccaagaacacagccgaa
ggtattatttctgaggccaaacgggcagcggagactcacaagaaagaaaaagtccttgaa
gctaaggaagagagtcaccgttaccgggctgaagttgaaacagagttaaagcaacgccgg
aatgaagtgcaaaagcaagaagaccggttgcttcaacgtgaagaaactttagatcacaaa
gagaatacttttgaaaagcgcgaggatgctttaggcaaaaaagaagataaaattgccaac
gagcaaaaacgtgttgaacaacagcaacaaagtgcagcttcactaatcacgcaacgtcaa
gctgagttagaacgggtcgcggccttgtcacaagaacaagctcgcgaacagattttgacc
caaacgcgcgaacaattaacgcatgaacgggccgtattaattaaagaaaatacggacgaa
gtgaaagcgcagtctgaaaaagaagccaaaaacttaattgtccaagcgattcagcaaagt
gccgccgatatggtctcagagaccacggtatcggtcgttgctttgccgaatgacgacatg
aaaggccggattattggccgggaaggtcgtaacattcgaacgttggaaactttgacgggg
attgatttaattatcgatgacacgccagaagccgtcgttttaagtggttacgatccgatt
cgtcgtgaaatcgcaaagatcgcgcttgaaaaactgattcaagacgggcggattcatcca
gctcggattgaagaaatggttgaaaaagcacgtaaggaaatggacgaaaaaatccgtgaa
accggtgaacaagccgtctttgacttaggtttgcatgggatgcatcctgatttaatcaag
ctagttggtcggttaaattatcggaccagttatggtcaaaatgttttgaatcactcaatt
gaagttgcgaagttggcgggcgtgttggccgctgaacttggtgaagatgttacactcgcg
aaacgcgcaggattattacacgatattggtaaggccgtcgatcatgaggtcgaaggatcc
cacgttgaaattggcgtggaattaacaacgaagtacaaagagagtcccgtcgtgattaac
acgattgcgtcccatcatggtgatgtggaagctaagtcgatcattgcggtattggttgcg
acgtctgattcgatttcagccgcccggccaggtgctcggagcgagtcgctggagaattat
attcaccggctcgaaaagctagaagcgatcgctaataatgaggatggggtcaagaagagt
tatgccatccaagctggtcgtgaaattcgggtcatcgttaagccaaatgaaatttctgat
ttacaggcaactgttttggcgcacgatgttaaaaagcagattgaaaatgaacttgaatat
cccggtcatattaaggttacggttattcgggaagttcgagcagttgattacgctaaataa

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