Lactiplantibacillus paraplantarum: ASU28_11345
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Entry
ASU28_11345 CDS
T04156
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lpx
Lactiplantibacillus paraplantarum
Brite
KEGG Orthology (KO) [BR:
lpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpx03400
]
ASU28_11345
Enzymes [BR:
lpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASU28_11345
DNA repair and recombination proteins [BR:
lpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ASU28_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALO04904
LinkDB
All DBs
Position
complement(2419734..2423336)
Genome browser
AA seq
1200 aa
AA seq
DB search
MSLQFVLGPAKMDHRRTMVAQLVATLTAKPQDQFFYLVPNHIKFDTEVDVLNRLAQAFEQ
PDLYAQTQVQVFSFTRLAWYLMKNEAAYQVPRLSAAGIDMLLYRILQRHADELRLFGGEI
SQTGFVTQLAREINELQTANLQPEDVVQLAANAQAGDLQAKLHDLAIVYKDFVAATADKY
LKPADVLVQLNAYLRRQDLHGTHVYVELAGFAQLPAQEQGIITTMLEQGADVTISLMLDH
KVVDHAPENGTLFYQSGRLYYRLYQYARIRRIPVSQDIYAETPRVVPGLVALDDFWRGQP
QAATGHEEPNTNVHLFRTDSRQTELAQVGRMIRAMVAKKHADPAADYHYRDFLIMTRHLD
AYQTMLAPTFHELEIPYFVDLQRSMADHPLVELINALFDIDAQQYQYRDVMRVLKTELLM
PNIDGQPMDRQAYRQAVDLTENFILKSGYHGQRWVQKEDWQYFQLTEGDAGVETDQNAEI
SRQINLIHHFVAETLPPFFKKMRQAPDGKAAVTLLINFLTSQGVTDQLLAWRDQALDRQD
VRAAAEPEQTWQTFCGMLDEYVTILGTEPFEITDFLALLQAGFEGASYSQIPSTLDQVLI
SESGMVQSQDRKVVFMVGATDLVMPDRIMTNNLLSDVDKENLQPTLSLLDGDHYLNDSAV
VQLGDESCLNYLAFLSARRHLFFSAPLKDDQETDLNWSNYVRRIQRQFNLREHTYLGTPD
PTNADARPFVGTKRRTISHVIQVYRDVLTTSTDRNRVGAPLQPAPVWVWLRQQLTRDPQF
GELARQLMAGLSYRNQPVKLTPASVEALYGHQIYTSISKLEEFYRNQYAYFLKYGLKLRE
RDVFELSAASTGEFFHAVLDGLIKALRSDQIPLAQASDQQLGQYLETVTRQILDQPQFTI
LTSSNRMAYLQRQLINTVRQIAFAIRNQSKLSAAEPKQTEVLFGNVGKEHGLKALDFQID
ATHSVHVRGKIDRLDQIQVADQSYLGIVDYKSSQHKFDFQEAYYGLAMQMLTYLDAVLHN
EQALVGSDQAAVKLAGALYMHIQNPTLKPKDIQGGFEAALLKKNKYKGILLDDPQLLEHL
DSELQQGNGTSKVYPFARKKDGSYSGGRAASLVTNDQLERLLQHNSQLIIAAAEAIFAGE
IQLNPIRLNDKTTALQYSPYLSIMQFDAMLAENAYRDLPPLSAKQVLDLLKTQKGGENHE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttacaatttgtattgggaccagccaagatggaccatcgccgtaccatggtggca
cagttagtggcaaccttgacggctaagccacaagatcagtttttctatttggtaccgaac
catattaagttcgatactgaagttgacgtgttgaaccgcttggcacaggcatttgagcaa
ccagatttgtatgcccagactcaggttcaggtcttttcatttacccgtctcgcttggtac
ttgatgaagaacgaggccgcttatcaagtgccacgactctccgctgctgggattgacatg
ctattatatcgcattctacaacggcatgccgatgagctgcgattgtttggtggtgaaatc
tcgcaaactggttttgtgactcaactagctcgtgaaattaatgagttacagaccgctaat
ttgcaaccagaagatgtggttcaattggcagcgaatgctcaggcgggtgacttgcaggct
aagctacatgatctggcgatcgtttacaaagactttgtggcggcgaccgcagataagtat
cttaagcccgctgatgttctcgttcaattgaatgcttacttacggcgtcaagatttgcat
gggacgcacgtttatgtggaactcgctggctttgctcaattaccggctcaggaacagggg
atcatcacgactatgctggaacagggcgcagacgtgacaatcagtttgatgcttgatcat
aaagttgtggatcatgcgcctgaaaacgggaccttattttatcaatctggtcggctttat
tatcggctttatcagtatgcccgtattcgccggattccggttagccaagatatttatgct
gaaacgccgcgcgtggttcccggcttagtggctctcgatgatttttggcgcggtcagccc
caagcggctaccggccacgaggagccgaatacgaatgtgcatttattccggaccgatagt
cggcagactgaattagcacaagttggccgcatgattcgggcaatggttgcgaaaaaacat
gccgatcctgctgccgattatcattatcgggacttcttgatcatgacacggcacttagat
gcctaccaaacgatgttagcgccgacttttcatgaattagaaataccatactttgtggat
ttgcagcgttcaatggccgaccatccgttagtcgagttgattaacgcgttgtttgatatc
gacgcgcagcagtatcaatatcgtgatgttatgcgagtattgaaaaccgagcttttgatg
ccaaatatcgatgggcaaccgatggatcggcaagcttaccgccaagcagtagatctgacc
gaaaactttatccttaaaagtggttatcacggccagcggtgggtacaaaaggaagattgg
caatactttcaattaaccgagggtgatgccggggtcgagacggatcaaaatgctgaaatt
tcgcgacaaatcaacttgattcatcactttgttgctgaaacgttaccaccgttttttaaa
aaaatgcggcaagcaccggatggcaaagcagccgtgacattgctgatcaactttctgaca
agccagggcgttacggaccaattattagcttggcgtgatcaagccttggatcgccaagat
gtccgggcagctgccgagcctgagcagacctggcaaactttctgtgggatgctagatgaa
tacgtgacgattttaggtacagagccatttgaaattacggactttttggcactattacaa
gcgggctttgaaggtgccagttactcgcaaattccgtcgacgttggaccaggtgttaatt
tcagagagcggaatggttcaaagtcaggaccgtaaagttgtcttcatggttggggcaaca
gatttagtgatgcctgaccggattatgacgaacaacttattgagtgatgtggataaagaa
aatttgcaaccaacgctcagtttgttagatggtgatcactatttaaatgattcagctgtc
gttcagcttggcgatgaaagttgtctgaattatttggcctttttaagtgcccggcgacac
ttgtttttcagtgcccccttaaaagatgatcaagaaacagatttaaattggtccaactat
gtgcggcgaattcaacgtcagttcaatttgcgagaacatacttatcttgggacgcctgat
ccgactaatgccgatgctcggccatttgttgggactaagcgccggacgattagtcatgtg
attcaggtttaccgcgatgtgttaacgacgagtactgaccgtaatcgtgttggcgcacca
ttacaacctgctccggtttgggtgtggttacggcagcaattgacgcgtgacccccaattc
ggtgagctagcacgtcaattgatggctggattaagttatcgcaatcaacctgttaagctg
acaccagccagcgttgaggctttgtatggacatcaaatttatacgtcaatttcaaaacta
gaagaattttatcgtaatcagtacgcttatttcttgaaatatgggctcaaactgcgtgag
cgtgatgtgttcgagttatcagctgctagtactggggagtttttccacgctgtcttagat
gggctcatcaaggcgttacggtctgatcaaatcccattggcccaagccagtgatcaacag
ttaggacagtatttagagactgtgacccgtcaaatcttagatcaaccacagtttacaatt
ttgacgagttctaaccggatggcttacttgcaacggcagctaatcaacacagtccggcag
attgcgtttgcgattcgcaatcaaagtaaactgtcagccgctgaaccgaagcaaaccgag
gtcttatttggtaacgttggcaaggaacacggattaaaagcgcttgattttcaaattgat
gcaacgcatagtgtgcacgtgcgggggaaaattgaccgtctcgaccaaatccaagtggca
gatcaaagttacctgggaatcgtcgattataagtcatcccaacataaatttgattttcaa
gaggcttactatggtctcgcaatgcaaatgttaacttatttggatgctgtgctgcacaac
gagcaagctttagtcggttctgatcaagctgcggtgaaattagctggcgcactttacatg
cacattcaaaatccaactctgaaaccaaaagatattcagggcggttttgaagcagcgctc
ctaaagaagaataagtataaggggattttgctcgatgatccgcagctattggaacattta
gatagcgaactacaacaaggtaacgggacctcgaaagtttacccattcgcacgtaaaaag
gatgggtcgtatagtggggggcgtgcagcttcactggtgacaaatgaccagttagaacga
ttattacagcataatagtcaattgattattgcagctgctgaagcgatttttgctggagaa
attcaactaaatccaatccggctgaacgataagacgactgctttacagtattcgccgtat
ctatcaattatgcagtttgatgcaatgttggcagaaaatgcctatcgggatctaccgcca
ttatcagccaaacaggttcttgatttactgaagacacagaaaggtggagaaaaccatgag
tga
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