Luteibacter pinisoli: FIV34_01990
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Entry
FIV34_01990 CDS
T06035
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIV34_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpy03021
]
FIV34_01990
03019 Messenger RNA biogenesis [BR:
lpy03019
]
FIV34_01990
Transcription machinery [BR:
lpy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FIV34_01990
Messenger RNA biogenesis [BR:
lpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FIV34_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QDE38051
UniProt:
A0A4Y5YYP1
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All DBs
Position
complement(435728..437557)
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AA seq
609 aa
AA seq
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MSDIETKDSNDAKGAGDQPATEPRPRTRRKAPAAAAPAVETSAPPPAPAPAPAPSPPTPP
PLPPAPAPQAELQLSNNHPSSEARQPQEPREGGQQQGQGGQGNQGQGNQGQNNTQGGGNA
GERREREGRGRRRRNDRNDRPERNDRPQQQQRQGGGGGNGGGNYQHQRNNNNGYPVDDDE
NADAGSNDRLINLTELKRKNSIQLLEFAESLGIREGVARQRKQDVVFNILKAHARSGGGI
WAEGVLEILQDGFGFLRSADESYLAGPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGER
YFAMLKVDDINGDPPEASKNKLLFENLTPLFPRKAFKLERGNGSTEDITGRILDLVAPIG
RGQRGLIVSQPKSGKTMMLQNIAQAIQYNHPDVHLIMLLIDERPEEVTEIARTVRAEVIS
STFDEPAVRHVQVAEMVIERAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGV
DANALQRPKRFFGAARNVEEGGSLTIIATALTDTGSKMDEVIYEEFKGTGNMEVHLSRRI
SEKRVYPAIDINRSGTRREDLLIEPDMLAKIWILRKLLHPMDELAAMEFMLDKMKNTKSN
DEFFNSMKR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatatcgaaacgaaagattccaacgacgccaaaggcgccggcgaccagcctgcg
accgagccgcgtccccgcacgcgccgcaaggcgccagccgccgccgcacccgcggtagag
acgagcgccccgccgccggctcccgcgcctgccccggcgccctccccgcccacgcctcca
cccctgccgcccgcaccggcgccgcaggcggagctccagctcagcaacaaccacccgtcc
agcgaagcgcgccagccgcaggagccccgtgagggcggccagcagcagggccagggcggt
caaggcaaccagggccagggcaaccagggccagaacaacacccagggcggcggcaacgcc
ggcgagcgccgtgagcgtgaaggccgcggccgtcgccgccgcaacgaccgcaacgaccgg
cccgagcgcaacgaccgcccgcagcagcaacagcgccagggtggcggtggtggcaacggt
ggtggcaactaccagcaccagcgcaataacaacaatggctatccggtcgacgacgacgag
aacgccgacgccggcagcaacgatcgcctgatcaacctcaccgaactcaagcgcaagaac
tccatccagctcctggagttcgccgagtcgctgggtatccgcgagggcgtcgcccgccag
cgcaagcaggatgtggtgttcaacatcctcaaggcccacgcccgctcgggcggcggcatc
tgggccgaaggcgtgctcgagatcctgcaggacggtttcggcttcctgcgctcggccgac
gagtcctacctggccggcccggacgacatctacgtctcacccagccagatccgccgcttc
aacctgcgcaccggcgattacatcaccggacgcgtgcgccacccgaaggaaggcgagcgt
tacttcgccatgctcaaggtggacgacatcaacggcgacccgccggaagcgtcgaagaac
aagctgctgttcgaaaacctcaccccgctgttcccgcgcaaggcgttcaagctcgagcgc
ggcaacgggtccaccgaggacatcaccggccgcatcctcgacctggtggcgccgatcggc
cgcggccagcgtggcctcatcgtttcccagccgaaatccggtaagacgatgatgctgcag
aacatcgcgcaggccatccagtacaaccatcccgacgtccacctgatcatgctgctgatc
gatgagcgcccggaagaagtcacggaaatcgcccgcacggtgcgcgccgaggtcatcagc
tccaccttcgatgagccggccgtccgccacgtgcaggtcgccgagatggtcatcgagcgc
gccaagcgcctggtcgagcacaagcgcgacgtcgtgatcctgctggattcgatcacccgc
ctggcccgtgcctacaacaccgtggtgcccagctccggcaaggtgctcaccggtggcgtg
gacgccaacgccctgcagcgccccaagcgcttcttcggcgcggcccgtaacgtcgaggaa
ggcggcagcctgacgatcatcgccacggcgctgaccgacaccggctccaagatggacgag
gtgatctacgaggagttcaagggcaccggcaacatggaagtgcacctgtcccgccgcatc
tcggaaaagcgcgtttacccggccatcgacatcaaccgctccggcacccgccgcgaagac
ctgctgatcgagccggacatgcttgccaagatctggatcctgcgcaagctgctccacccg
atggacgaactggccgccatggagttcatgctcgacaagatgaagaacaccaagtcgaac
gacgagttcttcaactcgatgaagcgctga
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