Luteibacter pinisoli: FIV34_04380
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Entry
FIV34_04380 CDS
T06035
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lpy
Luteibacter pinisoli
Pathway
lpy00521
Streptomycin biosynthesis
lpy00523
Polyketide sugar unit biosynthesis
lpy00525
Acarbose and validamycin biosynthesis
lpy00541
Biosynthesis of various nucleotide sugars
lpy01100
Metabolic pathways
lpy01110
Biosynthesis of secondary metabolites
lpy01250
Biosynthesis of nucleotide sugars
Module
lpy_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FIV34_04380 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FIV34_04380 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FIV34_04380 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FIV34_04380 (rfbB)
00525 Acarbose and validamycin biosynthesis
FIV34_04380 (rfbB)
Enzymes [BR:
lpy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FIV34_04380 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
DUF6301
NmrA
Motif
Other DBs
NCBI-ProteinID:
QDE38492
UniProt:
A0A4Y5YZR3
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Position
complement(969592..970641)
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AA seq
349 aa
AA seq
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MKTLLVTGGAGFIGANFVLQAIKAGHTVVNLDKLTYAGNLRTLASLEGNARHVFVHGDIG
DRTLVAGLLAAHRPDAVVHFAAESHVDRSIDGPAAFIETNVVGTLGLLEVSRDYWRGLEG
EAADAFRFLHISTDEVYGSLGAEGLFTETTAFAPNSPYSASKAASDHLVRAFHHTYGLPT
LTTNCSNNYGPFQFPEKLIPLVIQKALAGEALPIYGDGLNIRDWLYVEDHCSAIARVLEG
GRLGETYNVGGNSERTNLTVVKTICAILDELRPLDGGKPHETLITYVRDRPGHDRRYAID
ASKLKDELGWTPAHTFESGIRATVDWYLANEAWVRGILDGSYQLERLGA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattgctcgtcaccggcggcgccggcttcattggggcgaacttcgtccttcag
gccatcaaggccggccataccgtcgtcaacctggacaaactcacgtacgcaggaaacctg
cgcacgctcgcttcgctggaaggtaatgcacgccacgttttcgtccacggcgacatcggc
gaccggacgcttgtcgcaggcctgctcgcggcgcaccgccccgatgccgtggtgcatttc
gccgcggagtcgcacgttgaccgctcgatcgatggccccgccgctttcatcgagaccaac
gtcgtcggcaccctgggcctgctcgaagtatcgcgcgactactggcgtggcctggagggc
gaagcagccgacgcgttccgcttcctgcacatctccactgacgaagtgtacgggtcgctg
ggcgcggaaggccttttcacggagacgacggcgttcgcgcctaactcgccgtactcggcg
tccaaggcagcatctgaccatcttgtccgtgcgtttcaccatacgtacgggctgcccacg
ctgaccacgaactgctcgaacaactacggcccgttccagttccccgaaaagctgatcccg
ctggttatccagaaggcgctggcaggcgaagcgttgcccatctacggcgacggcctgaat
atccgcgactggctttacgtcgaagatcactgcagcgccatcgcgcgcgtgctcgaaggg
ggccgactgggcgagacgtataacgtcggcggcaattcggaacgtaccaacctcaccgtc
gtgaagacgatctgcgccattctcgacgagctccgcccgctcgatggcggcaaaccgcac
gaaacactcatcacgtatgtgcgcgaccgccccggacacgatcgtcgatatgcgatcgat
gccagcaagctgaaggatgaactgggctggacgccagcgcacacctttgaatccggcatt
cgggcgacggtcgactggtacctcgcgaacgaggcctgggtgcgcggcattctcgatggc
agctaccaactggagcgacttggcgcatga
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