KEGG   Luteibacter pinisoli: FIV34_04610
Entry
FIV34_04610       CDS       T06035                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lpy  Luteibacter pinisoli
Pathway
lpy02020  Two-component system
lpy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lpy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FIV34_04610
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FIV34_04610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpy03021]
    FIV34_04610
Transcription machinery [BR:lpy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FIV34_04610
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Relaxase_C HTH_31 HTH_IclR HTH_38 BRINP
Other DBs
NCBI-ProteinID: QDE38533
UniProt: A0A4Y5Z283
LinkDB
Position
complement(1023440..1024924)
AA seq 494 aa
MKPGLQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFAEDAESEAEAT
EETATFDETMDFRTRDEVPAKAAREDEESTASPSEELAPDWDDDRFHGEAGDYAGAPSRN
GGGDEDGFEPQNAAPESLQQHLEWQLNLSQFTPRDHAIATAIIHALDEDGYLRDGIEAVL
PALHDLHAGLEEIEAVRQRVQRFDPTGIASLDLRDCLLCQLGQFAETTPHRDLAIRIVSE
EIELLARNDTAKIARRLKAGEADVATAAALIRSLDPRPGAALDATPVEYVAPDVYARREN
GRWRVSLNADAQPRLGLNQHYCNLIARARGDDATWMKGQLQEARWLLKSLQSRAETLTKV
AEVIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHFF
SSGVATEDGGSASATAIQAMLRKLITAEDPRRPLSDQALAEELHRRGIQVARRTVAKYRE
AMRIPSSSERVRAN
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaaacccggacttcagtttcgcctgcatcagcagctcacgctgacgccacagctccag
caggccatccgcctgctccagctgtcgcagctggagcttgaggccgagcttcgccagata
gcggagagcaacccgctgctcgagttcgccgaagacgctgaatcggaagccgaggcgacc
gaggaaacggccacctttgacgaaacgatggatttccggacccgcgacgaagtgccggcc
aaggccgcccgcgaggacgaagagtccaccgcctccccctccgaggagctcgcccccgac
tgggacgacgaccgcttccacggcgaggcgggcgattacgccggcgccccgtcacgtaac
gggggcggcgacgaagacggcttcgaaccccagaatgcggcgccggaaagcctccagcag
catctggagtggcagctcaacctgtcccagttcaccccgcgtgaccacgccatcgccacg
gcgatcatccacgccctggacgaagacggttacctccgcgacggcatcgaggccgtccta
ccggcgctgcacgacctccatgccgggctggaagagatcgaggcggtgcgccagcgggtc
cagcgcttcgacccgaccgggattgccagcctggacctgcgcgactgcctgctttgccag
ctgggccagtttgccgagaccacgccgcaccgcgacctggccatccgcatcgtttccgaa
gaaatcgagctgctggcccgcaatgacaccgccaagatcgcccgccgcctcaaggccggc
gaggccgacgtggccacggcagccgcgctcatccgcagcctggacccccgtcccggcgcc
gcgctggacgccaccccggtggaatacgtggcgcccgacgtctacgcccgccgtgagaat
ggccgctggcgggtgagcctgaacgccgacgcccagccccggctgggcctcaaccagcat
tactgcaacctgatagcccgcgcccggggcgacgacgccacgtggatgaagggccagctg
caggaggcccgctggctcctgaagagccttcagtcgcgcgccgagacactcaccaaggta
gccgaggtgatcgtccgccggcagagcgccttcctcgactacggccccgaagccatgcac
ccgctggtgctgcgcgaggtggccgaagaggtgggtatgcatgaatcgaccatttccagg
gttaccacgcgcaagtacatgcacacgccgcgcggtaccttcgagctgaaacatttcttt
tccagcggcgtggccacggaagacggcggcagcgcgtccgcaacggccatccaggccatg
ctacgcaagctgatcacggcggaagacccgcgtcgcccgctgtccgaccaggctctcgcg
gaggagcttcatcgacgcggcattcaggtggcccgacgtacggtggccaagtaccgggaa
gcgatgcgcatcccaagttccagtgaacgcgtgcgcgccaactaa

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