Luteibacter pinisoli: FIV34_04610
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Entry
FIV34_04610 CDS
T06035
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
lpy
Luteibacter pinisoli
Pathway
lpy02020
Two-component system
lpy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIV34_04610
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FIV34_04610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpy03021
]
FIV34_04610
Transcription machinery [BR:
lpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIV34_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Relaxase_C
HTH_31
HTH_IclR
HTH_38
BRINP
Motif
Other DBs
NCBI-ProteinID:
QDE38533
UniProt:
A0A4Y5Z283
LinkDB
All DBs
Position
complement(1023440..1024924)
Genome browser
AA seq
494 aa
AA seq
DB search
MKPGLQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFAEDAESEAEAT
EETATFDETMDFRTRDEVPAKAAREDEESTASPSEELAPDWDDDRFHGEAGDYAGAPSRN
GGGDEDGFEPQNAAPESLQQHLEWQLNLSQFTPRDHAIATAIIHALDEDGYLRDGIEAVL
PALHDLHAGLEEIEAVRQRVQRFDPTGIASLDLRDCLLCQLGQFAETTPHRDLAIRIVSE
EIELLARNDTAKIARRLKAGEADVATAAALIRSLDPRPGAALDATPVEYVAPDVYARREN
GRWRVSLNADAQPRLGLNQHYCNLIARARGDDATWMKGQLQEARWLLKSLQSRAETLTKV
AEVIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHFF
SSGVATEDGGSASATAIQAMLRKLITAEDPRRPLSDQALAEELHRRGIQVARRTVAKYRE
AMRIPSSSERVRAN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggacttcagtttcgcctgcatcagcagctcacgctgacgccacagctccag
caggccatccgcctgctccagctgtcgcagctggagcttgaggccgagcttcgccagata
gcggagagcaacccgctgctcgagttcgccgaagacgctgaatcggaagccgaggcgacc
gaggaaacggccacctttgacgaaacgatggatttccggacccgcgacgaagtgccggcc
aaggccgcccgcgaggacgaagagtccaccgcctccccctccgaggagctcgcccccgac
tgggacgacgaccgcttccacggcgaggcgggcgattacgccggcgccccgtcacgtaac
gggggcggcgacgaagacggcttcgaaccccagaatgcggcgccggaaagcctccagcag
catctggagtggcagctcaacctgtcccagttcaccccgcgtgaccacgccatcgccacg
gcgatcatccacgccctggacgaagacggttacctccgcgacggcatcgaggccgtccta
ccggcgctgcacgacctccatgccgggctggaagagatcgaggcggtgcgccagcgggtc
cagcgcttcgacccgaccgggattgccagcctggacctgcgcgactgcctgctttgccag
ctgggccagtttgccgagaccacgccgcaccgcgacctggccatccgcatcgtttccgaa
gaaatcgagctgctggcccgcaatgacaccgccaagatcgcccgccgcctcaaggccggc
gaggccgacgtggccacggcagccgcgctcatccgcagcctggacccccgtcccggcgcc
gcgctggacgccaccccggtggaatacgtggcgcccgacgtctacgcccgccgtgagaat
ggccgctggcgggtgagcctgaacgccgacgcccagccccggctgggcctcaaccagcat
tactgcaacctgatagcccgcgcccggggcgacgacgccacgtggatgaagggccagctg
caggaggcccgctggctcctgaagagccttcagtcgcgcgccgagacactcaccaaggta
gccgaggtgatcgtccgccggcagagcgccttcctcgactacggccccgaagccatgcac
ccgctggtgctgcgcgaggtggccgaagaggtgggtatgcatgaatcgaccatttccagg
gttaccacgcgcaagtacatgcacacgccgcgcggtaccttcgagctgaaacatttcttt
tccagcggcgtggccacggaagacggcggcagcgcgtccgcaacggccatccaggccatg
ctacgcaagctgatcacggcggaagacccgcgtcgcccgctgtccgaccaggctctcgcg
gaggagcttcatcgacgcggcattcaggtggcccgacgtacggtggccaagtaccgggaa
gcgatgcgcatcccaagttccagtgaacgcgtgcgcgccaactaa
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