Luteibacter pinisoli: FIV34_04725
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Entry
FIV34_04725 CDS
T06035
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIV34_04725 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpy03019
]
FIV34_04725 (recQ)
03400 DNA repair and recombination proteins [BR:
lpy03400
]
FIV34_04725 (recQ)
Enzymes [BR:
lpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIV34_04725 (recQ)
Messenger RNA biogenesis [BR:
lpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FIV34_04725 (recQ)
DNA repair and recombination proteins [BR:
lpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIV34_04725 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
HHH
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QDE38555
UniProt:
A0A4Y5Z1N0
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All DBs
Position
1042541..1044352
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AA seq
603 aa
AA seq
DB search
MQSSAIDLLHSVFGYPAFRGQQQAIVEEVAAGGDALVLMPTGGGKSLCFQIPALMRYGTG
IVVSPLIALMQDQVDALVEAGVKARYLNSSLDALTQREVEEQLLAGDLDMLYVAPERLLT
PRFLALLDRIPIALFAIDEAHCVSQWGHDFRPEYRELTLLHERFPEVPRIALTATADDRT
REEIVERLRLTEARRFVSSFDRPNIRYRVAPRQNARRQLLDFLDAHRGDAGIVYCLSRRK
VDETAAWLAEAGVDALPYHAGLDPETRTRHQQRFLREDGIVMVATVAFGMGIDKPDVRFV
AHLDLPRSMEGYYQETGRAGRDGLPAEAWMVYGLGDVVTMSQMIAQSESGDDRKRIERAK
LDSLLGYAEATRCRRQLLLEAFAEPHAGNCANCDNCLVPPKTWDATLAAQKAMSAIYRSG
QRYGAGHLIDILRGDVAERVRELGHDKLSVFGVGADMDATQWRSVFRQLLAAGLVEADPE
GYGTLRLSSQSGPVLKGERKVELREDARPAKGRRTRSSAPAAGASLGIEATEEPLWNDLR
RVRAELAKAQGVPAYVIFHDATLLAMLRGLPQDEDELSAISGVGESKLKRYGKDFLAVLT
AAG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttccgcgatcgacctccttcattccgttttcggctatcccgcgttccggggc
caacagcaggccatcgtcgaggaagtcgccgcgggcggtgacgccctggtgctcatgccc
accggcggcggcaagtcattgtgtttccagatccccgcgctcatgcgttacggcaccggc
atcgtcgtgtcgccgctgatcgccctgatgcaggaccaggttgacgcgctggtcgaagcc
ggcgtgaaggcgcgctacctcaattccagcctggatgcgctcacccagcgcgaggtggaa
gagcaattgctcgccggcgacctggacatgctctacgtggcgcccgaacgcctgctcacc
ccgcgcttcctcgcgttgctcgaccgcatccccatcgcgctgttcgccatcgacgaggcg
cactgcgtctcgcagtggggccacgatttccgcccggaataccgcgaactcaccctgctg
cacgagcgcttcccggaagtgccacgcatcgcgctgaccgccacggcggacgaccgcacg
cgcgaggaaatcgtcgagcgcctccgcctcaccgaggcccgccgtttcgtttccagcttc
gatcgcccgaacatccgctaccgcgtcgcgccgcggcagaacgcgcgccggcagctgctg
gatttcctcgatgcgcaccgtggcgatgcgggcatcgtgtattgcctgagccgacgcaag
gtggacgaaaccgccgcgtggctcgccgaggcgggcgtggatgcgctgccgtaccacgcg
ggcctcgacccggaaacgcgtacgcgccaccagcagcgcttcctgcgcgaagacggcatc
gtcatggtggccaccgtcgcgtttggcatgggcatcgacaaacccgacgtgcgcttcgtg
gcgcatctcgacctgccgcgcagcatggaaggctattaccaggaaaccggccgcgccggc
cgcgatggcctgcccgcggaagcgtggatggtctacggcctgggcgatgtcgtgaccatg
agccagatgatcgcgcagtccgaatccggcgacgatcgcaaacgcatcgagcgcgccaag
ctcgatagcctgctcggctacgcggaagcgacccggtgccgccggcagctgctgctcgag
gcgtttgccgagccacatgcaggaaactgcgccaattgcgacaactgcctggtgccgccg
aaaacctgggacgcgacgctggccgcgcaaaaggcgatgtcggccatctaccgcagtggc
cagcgctacggtgccggccacctcatcgacatcctccgcggtgacgtggcggagcgcgtg
cgcgaactgggccacgacaagctcagcgtgtttggtgtcggcgcggacatggacgccacc
cagtggcgttcggtgttccgccagttgctggccgcaggactggtcgaagccgacccggaa
ggctacggcacgttgcgcctgtcatcgcagagcggccccgtactgaagggcgagcgcaag
gtggaactgcgcgaggacgcccgcccggccaagggccggcgcacgcgcagcagcgcaccg
gccgcgggcgcctccctcggcatcgaggcgacggaagagccgttgtggaacgacctgcgc
cgcgtgcgtgccgaactggcgaaggcccagggcgtgcccgcgtatgtcatcttccatgac
gcgacgctgctggcgatgctgcgcggactcccgcaggatgaagacgaactgtcggcgatc
agcggcgtcggcgagagcaagctcaagcgttacggcaaggatttcctggcggtgttgacc
gcggccgggtag
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