Luteibacter pinisoli: FIV34_05180
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Entry
FIV34_05180 CDS
T06035
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIV34_05180 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpy03021
]
FIV34_05180 (rpoA)
03400 DNA repair and recombination proteins [BR:
lpy03400
]
FIV34_05180 (rpoA)
Enzymes [BR:
lpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIV34_05180 (rpoA)
Transcription machinery [BR:
lpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIV34_05180 (rpoA)
DNA repair and recombination proteins [BR:
lpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIV34_05180 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
QDE38636
UniProt:
A0A4Y5Z199
LinkDB
All DBs
Position
1132772..1133770
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AA seq
332 aa
AA seq
DB search
MAVSSTSVLRPRGLSVEQLGANRAKVVVEPLERGFGHTLGNALRRVLLSSIPGSAIVEVE
IDGVLHEYTTLEGLQEDVIEVLLNLKDVAIRQHSGDEVTLTLSKKGKGVVTAGDIAVDHT
VEIVNPDHVICHLTKDVALNMRLKVRKGVGYQPASARQHPDDETRPIGRLQLDASFAPVL
RVAYEVDAARVEQRTNLDKLVLDIETNGTIGAEDAVRKAAEIINDQLSVFGDFSRRESDS
TKAEKGGFDPLLLRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLT
EIKDVLGGRGLALGMKLENWPPPGLSHGMQLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatcgtcaactagtgtgctgcggccccgcggcctcagcgtcgagcagctcgga
gcgaaccgcgccaaggtggtggtcgagccgctcgagcgtggctttggtcacaccctgggc
aacgcgctgcgccgcgtgctgctctcttcgattccgggcagcgccatcgtcgaagtcgaa
atcgacggcgtgctgcacgagtacaccaccctggaaggccttcaggaagacgtcattgag
gttctcctgaacctcaaggacgttgcgattcgccagcacagcggtgacgaagtcaccctg
acgctgtcgaagaaaggcaagggcgtggtcacggcgggcgatattgccgtcgaccacacc
gttgaaatcgtcaacccggaccatgtgatctgccacctcaccaaggatgtggccctgaac
atgcgtttgaaggttcgcaagggcgtcggctaccagccggcctctgctcgccagcatccg
gatgacgagacgcggccgatcggccgtctgcagctcgacgcgtcgtttgcgccggtgttg
cgcgtggcttacgaagtggacgccgctcgtgttgagcagcgcaccaacctcgacaagctc
gtgctcgacatcgagacgaacggcacgatcggcgctgaagacgctgtccgcaaggcggct
gaaatcatcaacgaccagctgtcggttttcggcgatttctcgcgccgcgagtccgattcg
accaaggcggagaagggcggtttcgatccgctgctgctccgtccgatcgacgacctcgaa
ctgacggttcgttcggcgaactgcctcaaggcagagagcatttactacatcggcgacctc
gtgcagaagacggaagtcgaactgctcaagacgccgaacctgggcaagaagtcgctgacc
gaaatcaaggatgtccttggcggtcgtggcctggccctgggcatgaagctcgagaactgg
ccgccgccgggtctgtcccacggcatgcagctcggctga
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