Luteibacter pinisoli: FIV34_05380
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Entry
FIV34_05380 CDS
T06035
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lpy
Luteibacter pinisoli
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpy03021
]
FIV34_05380 (rapA)
Transcription machinery [BR:
lpy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FIV34_05380 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QDE38674
UniProt:
A0A4Y5Z0R8
LinkDB
All DBs
Position
complement(1178046..1180877)
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AA seq
943 aa
AA seq
DB search
MFQPGQRWISTAEPELGLGTILRVEGRGVQVLFAKAGVLRPYAVDSAPLVRAEFRAGQRV
AGKGLAFLVERVDEREGLLVYRGEGRELEEGQLDDEQAMSQADDRLIGGRTDTNDKFDLR
AEGLRRRAEARRAASWGLESARIGLVPHQLRVAGIAAARRPPRVLLADEVGLGKTIEAGM
ILSRQLAAGRASRVLLLLPETLVYQWFVELLRRFNLSFSIFDEERCEAIEQASDGRNPFE
DEQLVIADFAFLESAPKRARQLVEAGWDLIVVDEAHHLEWTPEGASPRYTLVEELAVATP
GVILLTATPEQLGRAGHFARLRLLDPQRYSDLDSYLAESANFAPLSELATTLAEGTPLDA
AQRALISERFKGDREMAALLDRPNSSAALLAALIDRHGTGRAMFRNRRAGIGGFPSRVPD
FITIDPDTLGPGRRESLLAEFRSDIQQPPAPLEFDYSDDPRITALIGLLEAHPEDKFLLL
CRSQGKVMAIEDALRTKSGVGVARFHEGLGIVQRDRNAAFFAQRDGARLLICSEIGSEGR
NFQFAHRLVMWDLPLDPDLLEQRIGRLDRIGQKHEIAIHVPVVAQSAQHILARWYDEGLD
AFRSSPADGRELLRRFGSLLATLADEHAREDDDRDQELDALIAETRGAHEELSALIHAGR
DHLLELAASRDPHADDLAGSFARDDNDPSRDAFIQRLFEMYGVHAEELAKDIIMLDPQYL
STDGLPGFADGPLSITFSRDTALAREELPLLRMDHPMVLAAVDLLVSGETGNAAFLVDDN
LPVRTALLQSVFVLEVVANRSLDAGRFLPTTPLMISVDTKLTERPNFRPSDVAMRRAADR
NIDVARYRKFLSKLVPPMLEHAKDLAEGRAEVLKIEAVEAATAELDGEFSRLLALRGVNP
SITEAEIQAVAAERSDLLAALPDARLRLDAVRFVVSPDFLALR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacctggtcaacgctggatctccactgccgaacccgaactcggcctcggcacc
attcttcgcgtcgaagggcgcggtgtgcaggtcctgtttgccaaggcaggcgtattacgt
ccttacgccgtggatagcgccccgcttgtccgtgcggaattccgcgccggccagcgcgtg
gccggcaagggcctcgcctttctcgtcgagcgtgtcgacgagcgtgaaggcctgctggtc
tatcgcggcgaaggccgtgagctcgaagagggccagctggacgacgagcaggccatgtcc
caggcggatgaccgcctgatcggcggccgcaccgacaccaacgacaagtttgacctccgt
gcggaaggcctgcgccgccgcgctgaagcccgccgcgcggcctcgtggggcctggaatcg
gcccgcatcggcctggtaccgcaccagcttcgcgtcgccggcatcgctgccgcacgccgt
ccgccccgcgtcctgctcgccgacgaagtcggcctgggcaagacgatcgaggccggcatg
atcctgtcgcgccagctcgccgccggccgcgccagccgcgtactgctcctgctgccggaa
accctggtgtaccagtggttcgtggagctgctgcgccgcttcaacctttcgttctccatc
ttcgacgaagagcgctgcgaggccatcgaacaggccagcgacggccgcaatccgttcgag
gacgagcagctggtcatcgccgacttcgccttcctggaaagcgcgcccaagcgtgcgcgc
cagttggtcgaggccggttgggacctgatcgtcgtcgacgaagcgcaccatctggagtgg
accccggaaggcgcgagcccccgctacaccctcgtcgaagagctcgccgtcgccacgccc
ggcgtgatcctgctaaccgcgacgccggagcagctgggccgtgcaggccacttcgcccgc
ctgcgcctgctcgatccgcagcgctacagcgacctggacagctatctcgccgagtcggcc
aacttcgcgccgttgtcggagctggcgaccacgctggccgagggcacgcccctggacgcc
gcgcagcgcgcgctgatcagcgaacgcttcaagggcgaccgtgaaatggccgccctgctc
gaccgcccgaacagcagcgccgcgctgctggccgcgctgatcgaccgccatggcaccggc
cgcgccatgttccgcaaccgccgcgccggtatcggcggcttcccgagccgcgtgcccgac
ttcatcaccattgacccggacaccctgggcccgggccgtcgcgaatccctgctggccgag
ttccgctcggatatccagcagccgccggcgccgctcgagttcgactattccgacgacccg
cgcatcaccgcgctgatcggcctgcttgaggcacaccccgaggacaagttcctcctgctg
tgccgcagccagggcaaggtgatggccatcgaggacgccctgcgcacgaagagtggcgtg
ggcgtggcgcggttccacgaaggcctcggcatcgtgcagcgcgaccgcaacgcggcattc
ttcgcccagcgcgatggcgcccgcctgctgatctgctcggaaatcggctccgaaggccgc
aacttccagttcgcccatcgcctggtcatgtgggatctcccgctcgacccggatctgctc
gaacagcgtatcggccgcctcgaccgcattggccagaagcacgagatcgccatccacgta
cccgtcgtggcgcagagcgcgcagcacatcctcgcgcgctggtacgacgaaggcctggac
gcgttccgcagcagccccgccgacggccgcgagctgctccgtcgcttcggcagcctgctc
gccacgctggccgatgaacacgcgcgcgaagacgacgaccgcgaccaggaactggacgcg
ctgatcgccgaaacccgtggggcgcacgaggaactctcggcgctcatccacgccggccgt
gaccatctgctcgaactcgccgccagccgggatccccatgcggacgacctggccggcagc
ttcgcgcgcgacgacaacgacccgtcgcgcgatgccttcatccagcgcctgttcgagatg
tacggcgtccacgccgaagagctggcgaaagacattatcatgctcgatccgcagtacctg
tccaccgacggcctcccgggcttcgcggacggcccgctgtcgatcaccttctcgcgtgac
accgcgctggctcgcgaagagctgccgctgctgcgcatggatcacccgatggtgctggcc
gccgtggacctgctggtctccggtgaaaccggcaacgccgcgttcctggtggacgacaac
ctgccggtgcgcacggcgttgctgcagtccgtgttcgtgctggaagtggtggccaatcgc
agcctcgacgccgggcgtttcctgccgacgacgccgctgatgatctcggtggataccaag
ctcaccgaacggccgaacttccgtcccagcgacgtcgccatgcgccgcgccgcggatcgc
aacatcgacgtggcccgctaccgcaagttcctgtccaagctggtgccgcccatgctcgag
catgcgaaggacctggccgaaggccgcgcggaagtgctcaagattgaagccgtggaagcc
gccacggccgagctcgatggcgaattcagccgcctgctcgcgctgcgcggcgtgaatccg
tcgatcaccgaggcggagatccaggcggtggcggcggagcgtagcgacctgctcgctgcc
ctgcccgatgctcgcctgcggctcgatgccgtgcgcttcgtggtgagcccggacttcctc
gcgctgcgttga
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