Luteibacter pinisoli: FIV34_05625
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Entry
FIV34_05625 CDS
T06035
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03030
DNA replication
lpy03430
Mismatch repair
lpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV34_05625 (holA)
03430 Mismatch repair
FIV34_05625 (holA)
03440 Homologous recombination
FIV34_05625 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpy03032
]
FIV34_05625 (holA)
03400 DNA repair and recombination proteins [BR:
lpy03400
]
FIV34_05625 (holA)
Enzymes [BR:
lpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV34_05625 (holA)
DNA replication proteins [BR:
lpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV34_05625 (holA)
DNA repair and recombination proteins [BR:
lpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV34_05625 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
acVLRF1
AAA_chap_2nd
Motif
Other DBs
NCBI-ProteinID:
QDE38714
UniProt:
A0A4Y5Z0V7
LinkDB
All DBs
Position
1233731..1234741
Genome browser
AA seq
336 aa
AA seq
DB search
MPMQPAFWQKHLAGDRMAPVYLLVGEELLVLEAADALRAMARRLGYSEREVLEADSRFDW
DDLARSSAGLSLFATQRLLDLRLAGGRAGKDGGAAITAFVQDPPPDTTLLISATEWSSKH
EGAWTKAVDQGGVQVVFNAPRPNEWGQWISQRMASRGLQATPDAVAMLAERVEGNLLAAA
QEIDKLVVLAGDRRLDAATLEGLVADSARFDAFKLTDAAFAGDGGRALRILAGLHAEGEE
LIALMGWLVNQLQLALRLANARDFAAQAKVERLWPAREQLFRKALRRAPREHWMACLARA
ARIDRMAKGREQGDPWLEAERLVAAVAEPRAAAAFT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatgcagcccgccttctggcagaagcatctcgccggcgaccggatggcgccggtg
tacctcctggtcggcgaggagctgctggtgctcgaagccgccgatgcgttgcgcgccatg
gcgcgccgcctcggctacagcgagcgcgaagtgctcgaggccgacagccgtttcgactgg
gacgacctggcccgctcgtccgcgggcctttccctgttcgccacccagcgcctgctcgac
ctgcgcctggccggtggccgtgcgggcaaggacggcggtgcggcgattaccgcgttcgtc
caggacccgccgccggacaccacgctgctgatttccgccacggagtggagcagcaagcac
gagggtgcctggacgaaggccgtggaccagggcggcgtccaggtcgtcttcaatgcaccg
cggcccaacgaatggggccagtggatcagccagcgcatggcgtcccgtgggctccaggcg
acgcccgatgccgtggcgatgctggccgagcgggtggaaggcaacctgctcgccgccgcg
caggaaatcgacaagctggtggtcctcgccggcgaccgccggctggacgccgccacgctg
gaaggcctggtggccgacagcgcccgctttgacgccttcaagctgaccgacgccgccttc
gccggggacggcgggcgcgccctgcgcatccttgcggggctgcacgcggaaggcgaggaa
ctcatcgccctgatgggctggctggtgaaccagctacagctggccctgcgcctggccaat
gcccgggacttcgccgcccaggccaaggtcgagcggctgtggcctgcccgcgagcagctg
ttccgcaaggcgctgcgccgcgccccgcgggaacactggatggcctgcctggcacgcgcg
gcccggatcgaccgcatggccaagggccgcgagcagggcgatccgtggctggaggccgag
cgcctcgtcgccgcggtggccgagccgcgcgccgcggcggcgttcacatga
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