Luteibacter pinisoli: FIV34_05725
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Entry
FIV34_05725 CDS
T06035
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03030
DNA replication
lpy03430
Mismatch repair
lpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV34_05725 (dnaE)
03430 Mismatch repair
FIV34_05725 (dnaE)
03440 Homologous recombination
FIV34_05725 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpy03032
]
FIV34_05725 (dnaE)
03400 DNA repair and recombination proteins [BR:
lpy03400
]
FIV34_05725 (dnaE)
Enzymes [BR:
lpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV34_05725 (dnaE)
DNA replication proteins [BR:
lpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV34_05725 (dnaE)
DNA repair and recombination proteins [BR:
lpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV34_05725 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
QDE38734
UniProt:
A0A4Y5Z0X0
LinkDB
All DBs
Position
complement(1260027..1263569)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSVRFTHLHLHSEYSLVDSTIRIKQLIAACVRAGMPAVALTDENNMFGLVKFYKQCTAAG
IKPIGGCDIWVSSPDDPRPWRLTLICQDRDGYLNLSRLVSRAWREGQGTGRALVDASWLT
PGTVSGLIAIAGRESETARIALGSGLPAASTKLAFLRHLFPQRLYLELTRTGRENEEAWV
RAAMALAGEHGLPVIASNDVRFLERSGYDAHEARTCINQGRVLADPKRPRYYSEEQYFKS
ADDMAELFADIPEALENTVELAKRCNLELSFGTYYLPDFPVPEGHTLDTYIREQAQKGLD
ERLAHHPLAPGKTLADYQARLDREVDVIIGMGFPGYFLIVADFIGWGKDNGIPVGPGRGS
GAGSLVAWVLKITDLDPLQFELLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGR
DHVSQIITYGSMAAKAVLRDSGRVLGMGYGQVDRLAKLIPNRPLDLTLGDALGRTEKSKK
ETDRVVKEFCDVYETEEEPRALIDLALSLEGLTRNAGKHAGGVVIAPTPLTDFAPLYCEP
SGEGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINARRAKEGTEPLVIESLPLD
DPKVYELLKKAQTVAVFQLESRGMQGMLKDAQADRFEDIIALVALYRPGPMDLIPSFCAR
KHGKEAVEYPDPRVEPILKETYGIMVYQEQVMQMAQIVGGYTLGGADLLRRAMGKKKAEE
MVKHRATFREGAAKDGIEGDKADAIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHYP
AEFMAATISSDMDNTEKAVTFLDETRAIGIKVLPPDVNASAYMFEAVEPRVVRYGLGAIK
GVGQGICEEIAADRAARGPFKGLVDFCQRIGSNKLNKRVMEALVQSGALDGLGENRATLV
MHIPEAMRAADQEAKNRASGQVDIFGNAFGNAEAPSIIELSGSVPEWPLEQLLQGEHDTL
GHYLSGHPTDPWTTELAQLSSCPIGEIPQRYQPPKPRRNDDEDNSRFRRGPETPWTVAGM
VVGMRKRGESDAFVQIEDATGLLETSFFRDVFTDAAPLLTRGNIIVVEGGLRIDDFAGGY
QLRARKAYSLSDAMEHFGRLLTLKLNGVDGDFPRHLKHALMGFRGGRTPLLLSGYRNGVG
QASLELGDDWRVRALPDLMRTLRTLPGVLGTELRMVRPAD
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccgttttacccacctccacctgcacagcgaatactcgctggtcgattcgacg
atccgcatcaagcagctgatcgccgcgtgcgtgcgcgccggtatgccggccgtcgcactc
accgacgagaacaacatgttcgggctggtgaagttctacaagcagtgcacggcggcgggc
atcaagcccatcggcggctgcgatatctgggtgtccagcccggatgatccgcgcccctgg
cggctcaccctgatctgccaggaccgcgacggttacctgaatctctcgcgcctggtgtcg
cgcgcgtggcgcgaaggccagggcaccggccgtgcgctggtcgacgccagctggctcacc
ccgggcaccgtctcgggcctgatcgcgattgccggccgcgagagcgagacggcacgcatc
gcgctgggctcaggcttgccggccgcctcgacgaagctggccttcctgcgccacctgttc
ccgcagcgcctgtacctcgaactcacccgcaccggccgtgagaacgaagaggcctgggtg
cgcgccgccatggcgctggccggcgaacacggcctgccggtgatcgcgagcaacgacgtc
cgcttcctcgagcgctccgggtacgacgcgcacgaggcgcgcacctgcatcaaccagggc
cgcgtgctcgccgatcccaagcgtccgcgctattacagcgaagagcagtacttcaaatcg
gccgacgacatggccgaactgttcgccgatatccccgaggcgctggaaaacacggttgag
ctggccaagcgctgcaacctcgagctctcctttggcacgtactacctgcccgacttcccg
gtgcccgagggccacaccctcgacacctacatccgcgaacaggcccagaagggcctggac
gaacgcctcgcccaccatccgctggcgcccggcaagacactggccgactaccaggcgcgc
ctcgatcgcgaggtggacgtcatcatcggcatgggcttccccggttacttcctgatcgtg
gccgacttcatcggctggggtaaggacaacggcatcccggtgggtccgggccgtggttcg
ggtgccggctcgctggtggcgtgggtgctgaagatcaccgacctggatccgctccagttc
gagctgctgtttgagcgcttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatc
gacttctgcatggatcgccgcgacgaagtgatcgactacgtcgcgcgcaaatacggccgc
gaccacgtcagccagatcatcacctacggctccatggccgcgaaggcggtgctgcgcgat
tccggccgcgtgcttggcatgggctacggccaggtcgaccgcctcgccaagctcatcccg
aaccgtccgctcgacctcacgctgggcgacgcgctcggccgcaccgaaaagtcgaagaaa
gagacggaccgcgtcgtcaaggaattctgtgacgtctacgagaccgaggaagagccgcgc
gcgctgatcgacctggcgctgagcctcgaaggcctcacccgtaacgccggcaagcatgcc
ggtggcgtcgtcatcgcgcccacgccgctcaccgatttcgccccgctctactgcgaaccc
agcggcgaaggcgtcgtcacccagtacgacaaggacgacgtcgaagcggtaggcctggtg
aagttcgacttcctcggcctgcgcacgctcaccatcatcgactgggcggtgaaggcgatc
aatgcgcgccgggcgaaggaaggcaccgagccgctggtgatcgaatcgctgccgctggac
gatccgaaagtctacgagctgctgaagaaagcgcagaccgtcgcggtgttccagctggaa
tcgcgcggcatgcagggcatgttgaaagacgcccaggccgaccgcttcgaagacatcatc
gcgctggtggcactgtaccgccccggcccgatggacctgatcccgagcttctgcgcgcgt
aagcacggcaaggaagccgtcgagtatcccgacccgcgcgtcgaacccatcctgaaagag
acctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtcgggggt
tacaccctcggcggcgccgatctgcttcgccgcgccatgggtaagaaaaaagcggaggag
atggtcaagcaccgcgcgaccttccgcgagggtgccgcgaaggatggcatcgaaggcgac
aaggccgacgcgatcttcgacctcatggagaagttcgccggctacggcttcaacaaatcc
cacgcggccgcgtatgccctggtctcgtaccagacggcgtggctgaaggcgcattacccg
gcggagttcatggccgcgacgatttcgtcggacatggacaacaccgagaaggcggtgacc
ttcctcgacgagacgcgggccatcggcatcaaggtgctgccgccggatgtcaacgcgtcc
gcgtacatgttcgaggcggtggagccgcgcgtggtccgctacggcctgggcgcgatcaag
ggcgtgggccagggcatctgcgaggaaatcgccgccgaccgcgccgcacgtggcccgttc
aagggcttggtcgacttctgccagcgcatcggttcgaacaagctcaacaagcgggtgatg
gaagccctggtgcagtcgggtgcgctcgacggcctgggcgaaaaccgcgcgacgctggtg
atgcatatccccgaggccatgcgtgccgccgaccaggaagcgaagaaccgcgcctccggg
caggtcgacatcttcggcaacgcgttcggtaatgccgaagcacccagcatcatcgagctc
tccggctcggtgcccgagtggccgctggaacagctgctgcagggcgagcacgacaccctc
ggccattatctctcgggccatccgacggacccgtggacaaccgaactggcgcagctctcc
agctgccccatcggcgagattccgcagcgttaccagccgccgaagccgcggcgcaacgac
gacgaggacaacagtcgcttccgtcgtggtcctgaaacgccgtggacggtggcgggcatg
gtggtcggcatgcgcaagcgtggcgagagcgatgccttcgtgcagatcgaagacgccacc
ggcctgctggaaaccagcttcttccgcgatgtgttcaccgatgccgcaccgctgctcacg
cgcgggaacatcatcgtcgtggaaggcggcctgcgcatcgacgatttcgccggcggctac
cagttgcgcgcgcgcaaggcgtattcgctttccgacgcgatggaacactttggccgcctg
ctcacgctgaagctcaacggcgtggacggcgatttcccgcgccacctcaagcacgcactg
atgggttttcgcgggggccgcaccccgttgctgctgtcgggctatcgcaacggcgtcggc
caggccagcctcgaactcggcgacgactggcgcgtgcgcgccctgcccgacctgatgcgc
accctgcgcaccctgcccggcgtgctcggcacggaactgcgcatggtgcgcccggcggac
tga
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