Luteibacter pinisoli: FIV34_06345
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Entry
FIV34_06345 CDS
T06035
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIV34_06345 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpy03400
]
FIV34_06345 (uvrB)
DNA repair and recombination proteins [BR:
lpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIV34_06345 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIV34_06345 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
Motif
Other DBs
NCBI-ProteinID:
QDE38848
UniProt:
A0A4Y5Z318
LinkDB
All DBs
Position
1386361..1388382
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYQPAGDQPLAIQRLTEGFESGLASQTLLGVTGSGKTFTIANVIDKIQKPT
IVLAPNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDSSINDHIE
QMRLAATKALLSRRDSLIVATVSAIYGLGDPEDYMSLRLILSRGDHVDQRALIRQLTELQ
YVRNEMELRRGTYRVRGEIIDVFPAESEAEALRIELFDGDVENLSVFDPLTGEVLRKVPR
YTVYPKTHYATTRQSVLNAMETIKVELSERLEQLYKDNKLVEAQRLEQRTRFDLEMMAEV
GFCQGIENYSRHMTRRGPGEPPPTLFDYLPPDALMVVDESHVTVPQLGAMYKGDRSRKET
LVEFGFRLPSAMDNRPLKFDEWERRAPRAIYVSATPAKYELEHSDDNIVELVVRPTGLID
PEVEVRPVRTQVDDLLGEIRKRIAMGDRVLVTTLTKRMSENLTDYLSEHDVKVRYLHSDI
ETVERTEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNVRGKAILYADEITGSMKEAMDETARRREKQIEYNTANGITPKTVVRRIADIMEGA
RSDLGSRGKGKKGKDAKKVAEVAEDYSALSTEQVGSMIKKLETRMYKHAQNLEFEEAGKV
RDEIHRLRERALR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgcttccagctcgtctcgccttaccagcccgcgggtgaccagcccctggcc
atccagcgcctcaccgaagggtttgagtcggggctcgcctcgcagaccctgcttggtgtg
accggttccggcaaaaccttcaccatcgccaatgtgatcgacaagatccagaagccgacc
attgtgctggcgcccaacaagacgctggccgcgcagctctatggtgagttcaaggagttc
ttcccgcataacgcggtggagtacttcgtcagctactacgactactaccagcccgaagcg
tacgtggtggcctcggataccttcatcgagaaggattcgagcatcaacgatcacatcgag
cagatgcgccttgccgcgaccaaggcgctgctgtcgcgtcgcgattcgctgatcgtcgct
accgtttcggcgatctacggtctgggtgacccggaggattacatgagcctccggctgatc
ctgtcgcgcggcgaccacgtcgaccagcgcgccctgatccgccagctcaccgaactgcag
tatgtccgcaacgagatggaactgcgccgcggtacgtatcgcgtgcgcggcgaaatcatc
gacgtcttcccggcggaatccgaggcggaagccctgcgcatcgagctgttcgacggtgac
gtggaaaacctttcggtattcgaccccctgaccggcgaagtcctgcggaaagtgccccgc
tacaccgtgtatcccaagacgcattacgccacgacgcggcaaagcgtgctcaatgcgatg
gagaccatcaaggtcgagctttccgagcgcctggagcagctctacaaggacaataagctg
gtcgaggcacagcgactggagcagcgcacgcgcttcgacctggaaatgatggccgaggtg
ggtttctgccagggtatcgagaactattcgcggcacatgacccgtcgcggccccggcgag
ccgccgccgaccctgtttgactatctgccgccggatgcgctgatggtggtcgacgaatcg
catgtgaccgtgccgcagctcggtgcgatgtataagggcgaccgctcgcgcaaggagacg
ctggtcgagttcggattccgcctcccgtcggcgatggataaccgcccgctgaagttcgac
gaatgggagcgccgtgcgccgcgagccatttacgtatcggccacgccggcaaagtacgag
ctcgagcattccgacgacaatatcgttgaactggtcgtgcgcccgactggcctgatcgac
cccgaggtcgaggtgcgcccggtgcgcacccaggtggacgatctgctgggcgagattcgt
aagcgcatcgccatgggggatcgcgtgctcgtcacgacgctcaccaagcgcatgtcggag
aatctcaccgattatctgtccgagcacgacgtaaaggtccgctacctgcattccgatatc
gaaacggtggagcgcacggaaatcattcgcgacctgcgcctgggcgagtttgacgtgctg
gtgggcattaacctgctccgcgagggcctggacatgcccgaggtctcccttgtcgcgatc
ctggatgcggacaaggaaggcttcctgcgttccacgcggtccttgatccagaccatcggc
cgcgcggcacgtaacgtgcgcggcaaggcgatcttgtacgccgatgagatcaccggctcc
atgaaagaggccatggacgaaacggcgcgccgccgcgagaagcagatcgaatacaacacg
gccaacggcattacgccgaagacggtggtccggcgcattgccgacatcatggaaggtgcc
cgttccgacctgggctcgcgagggaagggcaagaagggtaaggatgcaaagaaggtggcc
gaggtggcggaggactacagcgcgctgagcaccgagcaggtcggctcgatgatcaagaag
ctggagacgcggatgtacaagcacgcccagaacctggagttcgaggaggcgggcaaggtg
cgcgacgagatccaccggctgcgcgagcgggccctgcgctga
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